KEGG   Hydrogenobacter thermophilus: HTH_1293
Entry
HTH_1293          CDS       T01167                                 
Symbol
recJ
Name
(GenBank) single-strand-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hth  Hydrogenobacter thermophilus
Pathway
hth03410  Base excision repair
hth03430  Mismatch repair
hth03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HTH_1293 (recJ)
   03430 Mismatch repair
    HTH_1293 (recJ)
   03440 Homologous recombination
    HTH_1293 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hth03400]
    HTH_1293 (recJ)
DNA repair and recombination proteins [BR:hth03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     HTH_1293 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     HTH_1293 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HTH_1293 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB GLUCM-like_C Toprim
Other DBs
NCBI-ProteinID: BAI69746
UniProt: D3DIU4
LinkDB
Position
1178551..1180203
AA seq 550 aa
MKGISGRDWLILSHLIKPQRQMEEKYGYLIAQILANRNLDDKIFDNRLRNLLPYHLIPNI
EQAVEKIARSVKEGKRIVIYGDYDVDGVTGSAILYDFLKKAGAKVYAVLPTRQTGYGLRK
ELVETFSKYAQLLITIDNGTTAIEELKDPPIETIVVDHHNPHEELPNALVVNPKIDEGLP
NELKEISSVALSFYLVARLRRELEVDVDVRDYLYLTSIGTIADVMPLNPLNRILVSNGIR
MLNYIASGGETKAYGIKVLMESIGIRGEVTSRDIAFSIAPRLNAPGRVSKPSIAMNLLLS
KDENTARMWLKKVEEANEQRKYISNVAFEKAMSEITSKKDRNFLVVRMGEWASGVAGIVA
GKLSSMLSKPSAVFSVGKDLATASVRGVEGINVYEGLKKLSHMFLRWGGHTSAAGLTIRK
EHLDEFEMMIDQVFSEIKGEEPRLYIDMILDPTHVDEGVLRSLKMLEPYGEGFPQPVFVS
EPLRIEKIEENNGRWLLKAQPNINFFAYNVQWRKNIENILFSKRRVVYTVDTRRSNFFNL
VDVEDLNGSG
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaagggtatatctggaagggattggctaatactgagccatcttataaaaccccaaagg
cagatggaggaaaagtacggatacttgatagctcagatacttgccaacagaaacttggat
gacaagatttttgacaaccggctaaggaatctgcttccttatcacctcatacccaacata
gagcaagctgtggagaagatagcaaggagtgtaaaggaagggaagagaatagttatatac
ggggactacgatgtggatggtgtaacgggaagtgccatcctttatgactttttaaaaaag
gccggagctaaggtctatgctgtgcttcccacaagacagacaggctacggacttagaaaa
gagctggtggagactttttctaagtatgcccagcttctgatcaccattgataacggcact
acggctattgaggaactcaaagaccctccaatagaaaccatagtagtggaccatcacaat
ccccacgaagagcttcccaatgcgctggttgtaaacccaaagatagacgaagggttaccc
aacgaactaaaggaaatatcctcggtagccttgagcttttatttggtggcaaggctcaga
agagagctggaagtagatgtggatgtaagagattacctttaccttacctccataggcacc
attgcagatgttatgccactcaatcctctgaatcgcatacttgtatccaacggtatcagg
atgctaaactacattgcatcaggtggggagacaaaagcttacggtataaaagttttaatg
gagagcataggcataaggggcgaggtcacctcaagggacatagccttctctatagctcca
aggctcaacgcaccgggcagagtttcaaaaccgagtatagccatgaacttgctcctatca
aaggacgaaaatactgccagaatgtggcttaaaaaagtggaagaggcaaacgagcagaga
aagtatatctccaatgtagcttttgaaaaagctatgagtgaaataacttccaaaaaggat
aggaactttcttgtggtgcgtatgggcgagtgggcaagtggagtggctggcattgtggca
ggcaaactttcaagcatgctttcaaaaccttctgcggttttttccgtaggtaaagacctg
gcaaccgcttccgtaagaggcgtggaaggtataaatgtttacgaggggctaaaaaagctt
tcacacatgtttttaaggtggggagggcacaccagcgctgcaggtctaaccataagaaaa
gagcatctggacgagtttgaaatgatgattgaccaagtgttttcggaaataaagggagaa
gaaccaagattgtatatagacatgatcctggaccctacccatgtggatgagggtgttctc
agaagtctcaagatgcttgaaccttacggtgaaggctttccgcagccagtgtttgtatcc
gaacctctgaggatagagaagatagaggaaaacaacggtagatggcttttaaaagcccag
cctaacataaatttctttgcttacaatgttcaatggagaaagaacatagagaatatcctt
ttctcaaaaagaagggtagtttatacagtagataccagaaggagcaattttttcaacctt
gtggatgtggaggacttaaatggctctgggtaa

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