KEGG   Halopiger xanaduensis: Halxa_2974
Entry
Halxa_2974        CDS       T01532                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hxa  Halopiger xanaduensis
Brite
KEGG Orthology (KO) [BR:hxa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hxa03400]
    Halxa_2974
Enzymes [BR:hxa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Halxa_2974
    5.6.2.6  RNA 3'-5' helicase
     Halxa_2974
DNA repair and recombination proteins [BR:hxa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Halxa_2974
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII AAA_25 HypA Lhr_WH AAA_19 Zn-ribbon_8
Other DBs
NCBI-ProteinID: AEH37590
UniProt: F8D4W3
LinkDB
Position
2299462..2302302
AA seq 946 aa
MTDGDVAAFTHLGSTVRGALSERGFSTPTAPQRLAIPPLAAGQNTLVIAPTGSGKTETAM
LPVFDHLVADDGPPEGFGALYVTPLRALNRDMRERLEWWGEYLGLEVDVRHGDTTQYQRG
KQAENPPDVLITTPETVQAMLTGERLREALQDVSHVVIDEVHELAASKRGAQLAIGLERL
HDLAGEMQRIGLSATVGDPEDVGQFLTGGRPCEIREIDVGSNVDVAVRQPEITEEDKELS
GTLMTDASTASHVRLIRDVVADHESTLIFVNTRQTAEALGSRFKELDLPIGVHHGSLSKE
ARIEVEDRFKTGELDGLLCTSSMELGIDVGRVDHVIQYKSPRQVTRLLQRIGRAGHRQDE
VSSGTIVTTRPDDTFEALAIARRAREGEVEPAAIHEGSLDVVANQIPGIVQSRGDTRFRE
AYDTVTRAYPFRDLPEETLREICSELHRNRIVWFDEGEDRLETTGGTWQYVYANLSMIPD
EETYEVHDIASGQQIGTLDERFVVNFAQPGEVFVQRGEMWRIAEIDDEEGKVKVSPIEDP
AGEVPSWIGQEIPVPAAVAQEVGEIRAVAQPQLETGADAAAVGRELAHRYPADEYTLTEA
CDQLEKQIEAEAPMPTADRIVLERQGRTIVLNACFGHTANETLGRVLSALLGQRAGSSVG
LETDPYRIELEVPSSIATSDVVEVLEDTDPDHVETIVELGLKNSDALAFRLAQVSAKFGA
LKRWQGQGSGRISNERLLAALEDTPMYEEAVREVFHEDLDIERASAVLAGIQSGELELVT
QRGRTPVGQGGRSSSGKELLAPENADASVIETVRERLQNDRVILLCTHCKDWKVKTKVKR
VSDQPECPECGSTRIASLNPWAEEVVQAVRAAEKDEEQERMTERAYRAASLVQSHGKRAV
TAMAARGVGPHNAAQIINKLRENEDEFYRDILSKEREYARTQSFWD
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgactgacggggacgtcgcggcctttacgcacctcggttcgacggttcgcggggcgctt
tccgagcgcgggttttcgacgccgacggcgccccagcggctggcgattccgccgctggcc
gcggggcagaacacgctcgtgatcgcgcccaccgggagcggcaagaccgagacggcgatg
ctccccgtgttcgaccacctcgtcgccgacgacgggccacccgaggggttcggcgcgctc
tacgtcaccccgctgcgggccttgaaccgcgacatgcgcgagcgcctcgagtggtggggc
gagtacctcggcctcgaggtcgacgtccgccacggcgacacgacccagtaccagcggggg
aagcaggccgagaacccgccggacgtgctgatcacgacccccgagacggtgcaggcgatg
ctcaccggtgagcgcctgcgcgaggccctgcaggacgtctcccacgtcgtgatcgacgag
gtccacgaactcgccgcctcgaagcggggcgcgcagttggcgatcggtctcgagcgactg
cacgacctcgcgggcgagatgcagcggatcggcctgtcggcgaccgtcggcgaccccgag
gacgtcggccagttcctcaccgggggccgcccctgcgagatccgcgagatcgacgtcggg
agcaacgtcgacgtggcggtccgtcagcccgagatcaccgaggaggacaaggaactgtcg
gggacgctgatgaccgacgccagcacggccagccacgtccggctgatccgcgacgtcgtc
gccgaccacgagtcgacgctgatcttcgtcaacactcgccagaccgccgaggcgctggga
tcgcggttcaaggaactggacctcccgatcggcgtccaccacggctcgctctcgaaggag
gcccggatcgaggtcgaggatcggttcaagacgggcgaactggacgggctgctctgtacg
tcctcgatggaactcgggatcgacgtcggccgcgtcgaccacgtgatccagtacaagagc
ccgcggcaggtcacgcgcctgctccagcggatcggccgtgccggccaccgtcaggacgag
gtttcgagcggcaccatcgtcacgacccggccggacgacaccttcgaggcgctcgcgatc
gcccgccgcgcccgcgagggcgaggtcgaaccggcggcgatccacgagggcagcttggac
gtcgtcgccaaccagatcccagggatcgtccagagccgcggcgacacccgcttccgggag
gcctacgacaccgtcacgcgcgcgtacccgttccgtgacctccccgaggagacgctccgc
gagatctgctcggaactgcaccgcaatcggatcgtctggttcgacgagggggaggatcgc
ctcgagacgaccggcgggacctggcagtacgtctacgcgaacctctcgatgatccccgac
gaggagacctacgaggtccacgacatcgcatcgggccagcagatcggcaccctggacgag
cggttcgtcgtcaacttcgcccagccgggcgaggtgttcgtccagcgcggcgagatgtgg
cggatcgccgagatcgacgacgaagagggaaaggtgaaggtcagcccgatcgaggacccc
gccggcgaagtgccctcctggatcggacaggagattccggtccccgcagcggtcgcccag
gaggtcggcgagatccgggccgtcgcacagccccaactcgagacgggtgccgacgcggcc
gccgtcggccgcgaactcgcccaccggtatccggccgacgagtacacgctcaccgaggcc
tgcgaccaactcgagaaacagatcgaagccgaggcgccgatgccgacggccgaccggatc
gtcctcgagcgacagggccggacgatcgtgctcaacgcctgcttcggccacacggccaac
gaaacgctgggccgcgtgctctcggcgctgctgggccagcgggccggttcctccgtggga
ctggagaccgacccctaccggatcgaactcgaggtcccgagttcgatcgcgaccagcgac
gtcgtcgaggtgctcgaggacaccgacccggatcacgtcgagacgatcgtcgagctcggg
ctcaagaactccgacgccctggcgttccggctcgcgcaggtctccgcgaagttcggcgcg
ctcaagcgctggcagggccagggctcgggccggatctccaacgagcgcctgctcgcggcg
ctggaggacacgccgatgtacgaggaggcggtccgcgaggtgttccacgaggatctggac
atcgagcgggcgagcgcggtgctcgcggggatccagtcgggcgagctcgagttggtcacc
caacgcggccgcacgccggtcggacaaggcgggcgctcgtcttcggggaaggaattgctc
gcgccggagaacgccgacgcgagcgtcatcgagacggtcagggagcgcctgcagaacgac
cgggtcatcctgctgtgtacccactgcaaggactggaaggtcaagacgaaggtcaagcga
gtctcggaccagcccgagtgtcccgagtgcggctcgactcggatcgcgtcgctgaacccg
tgggccgaggaggtcgtgcaggcggtccgagcggcggagaaagacgaggaacaggagcgg
atgaccgagcgcgcctaccgcgccgcgagcctggtccagagtcacggcaagcgggccgtc
accgcgatggccgcccgcggcgtcgggccgcacaacgccgcccagatcatcaacaagctc
cgcgagaacgaggacgagttctaccgggacatcctctcgaaggagcgcgagtacgcccgg
acccagtcgttctgggactga

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