Hydrogenobaculum sp. Y04AAS1: HY04AAS1_1263
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Entry
HY04AAS1_1263 CDS
T00745
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
hya
Hydrogenobaculum sp. Y04AAS1
Pathway
hya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HY04AAS1_1263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hya03400
]
HY04AAS1_1263
Enzymes [BR:
hya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HY04AAS1_1263
DNA repair and recombination proteins [BR:
hya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HY04AAS1_1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
ResIII
SNF2-rel_dom
RecG_dom3_C
SRP_TPR_like
UMPH-1
SecA_DEAD
TniB
Flavi_DEAD
SLFN-g3_helicase
SWI2_SNF2
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
ACG57948
UniProt:
B4U9Y7
LinkDB
All DBs
Position
complement(1169246..1171642)
Genome browser
AA seq
798 aa
AA seq
DB search
MMEDLEKPISLIKDLLSSDIKLERVKGFGAYISNALKPYISESLYESLNIIDELSKEKKR
ALLEQILQELEAFVRPNYQTTTTQKQNLRRIRDLNIKIEDMDFLNKNQKKILHASGLNTL
IDVLWYFPYTYENRLVLKSISSLALDSYGTVLVKIENLIYDEKEKFPFSIIAADGKSKLV
LKFRAKDKSVMGWYQKGQNIVVYGMLKEFRGQKYMIHPKIFSESSKEIDIIKPVYPLERF
EDPQSILASSSQKRRKLLESSIKSILNYYKDYWQNLQDILPEEFLKDNDLIPLSTAFKII
HAEDYFKDFRSFESMLSKAKKRFLYEEIFIFELAMLKRRSLVKSLNAPSINADPESIIKE
VQSHISFPLTNAQKRAITEIINDMRSTKPMSRLLQGDVGSGKTLVGISSALAVLKDGFQA
AVMVPTEILANQHYKNFHDFFSKLGYRVGLLTSSTSKTDIHKLISIGEINIVIGTHALVQ
EKVKFKNLGFAIVDEQHRFGVAQRQILLEKNNNLMPHMLYMSATPIPRTIAMGIFGDLDI
SVLDEMPAMRKPVKTSVLYSDNQKDMAFLIEHIKKELSNGNKVYIVYPLIEESEKLDLKA
AQTEYEKWKNIFKDYKVLLLHGRMSDKEKSKVMEEFKESGHILVSTTVIEVGIDVKEAST
IVIEDAYRFGLSQLHQLRGRVGRGDKEGYCFLLVNSSFVKSQKLTEQNATLQRLRIMVKT
RNGFEISLEDLKLRGPGDVLGLSQSGYFGFNFANLKNEEHLRLMSTIREAIPKYKKGISE
DLMWFVNKKYMDEKVIVA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatttagaaaagcccatatcccttataaaagatttactttcaagcgatatt
aaattagaaagggtaaaaggttttggagcttatattagcaacgcattaaaaccatacata
tcagaaagcctttatgaaagtctaaatatcatagatgagctttcaaaagaaaagaaaaga
gcccttttagaacaaatacttcaagagttagaagcttttgtaaggccaaactatcaaact
accacaacccaaaagcaaaaccttagaagaataagggatttaaacataaaaatagaggat
atggattttttaaacaaaaaccaaaagaagatactccatgcaagtggtctaaatacccta
atagatgtgctttggtattttccatacacctacgaaaacaggcttgtattaaaatcaatt
tcctcattagctttagatagttatggcactgttttggtgaagatagaaaatctcatatac
gacgagaaagagaaatttccttttagtataatcgcagcagatggtaaatctaagctggtt
ttaaagtttagagcaaaagataagtctgtgatgggctggtaccagaagggacaaaatata
gtagtctatggtatgctgaaagagtttaggggccaaaaatacatgatacatccaaagata
tttagtgaatcctcaaaagaaatagatatcataaaacctgtttatccgttggaaagattt
gaagatcctcaaagcatattggcttcctcttctcaaaaaagaagaaagcttttagaatct
tctataaaatcaatattaaactactacaaagattactggcaaaacttacaagatatatta
ccagaggaatttttaaaagacaacgatttgatacctctttctacagcttttaagataata
catgctgaagattactttaaagacttcagaagttttgagtccatgctatcaaaagccaaa
aaacggtttttgtatgaagagatatttatatttgaacttgctatgttaaaaaggcgctct
ttggtaaaatctctaaacgccccttctataaacgctgatccagagagtataataaaagag
gtacaatctcatataagctttcctcttacaaacgcacaaaaaagagctatcacagaaata
ataaacgatatgagatctacaaaaccaatgagtagactacttcaaggggatgtgggaagt
ggtaaaacccttgtaggtatttccagtgctttggcggtactaaaagatggttttcaagcg
gcggtgatggtgcctactgagatattggcaaaccagcattataaaaactttcatgatttt
ttctcaaagttaggttatagggttgggcttttaacatcttcaacatcaaaaacagacatt
cacaaacttatatccataggggagataaatatagtaataggtacccatgctttggtccaa
gaaaaagtaaagtttaaaaatcttggttttgccatagtagatgagcagcatcgctttggc
gtagctcaaagacaaatattgttagaaaaaaacaacaacctcatgccccatatgctttat
atgagtgctactcccattcctaggactatagctatgggaatttttggagatttagatatc
tctgttttggatgaaatgccagccatgagaaagccagtaaaaacctctgttttatattca
gacaatcaaaaggatatggcgtttttgatagagcatattaaaaaggagctatcaaacggc
aataaagtatacatagtttatcctcttatagaagaatctgaaaaactagatttaaaagct
gcccaaaccgaatacgaaaaatggaaaaacatatttaaagattacaaagtgcttcttttg
cacggtcgcatgagcgacaaggaaaaatcaaaggttatggaagagtttaaagaaagtggg
catatattggtatccaccaccgttatagaagtaggtatagatgtaaaagaggctagcacc
atcgttatagaggatgcttataggtttggtttgtctcagcttcatcagttaagaggaaga
gtaggtagaggtgataaagaaggctattgttttttattggtaaacagctcttttgtcaaa
agccaaaaactcacagaacaaaatgccacattgcaaagattacgtattatggtaaaaaca
agaaacggttttgaaatatccttagaagatttgaaactaagggggcctggtgatgtgctt
ggtctttcacaatctggttattttggttttaattttgcaaatttaaaaaacgaagaacat
ttaagattgatgagcaccataagagaggctattccaaagtacaaaaagggtataagcgaa
gatcttatgtggtttgtaaataaaaagtatatggatgagaaggttattgtggcttag
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