Hymenobacter sedentarius: AUC43_04110
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Entry
AUC43_04110 CDS
T04242
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hyg
Hymenobacter sedentarius
Brite
KEGG Orthology (KO) [BR:
hyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyg03016
]
AUC43_04110
Enzymes [BR:
hyg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AUC43_04110
Transfer RNA biogenesis [BR:
hyg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AUC43_04110
Prokaryotic type
AUC43_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3098
Motif
Other DBs
NCBI-ProteinID:
ALW84344
UniProt:
A0A0U4C2G9
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All DBs
Position
979126..979890
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AA seq
254 aa
AA seq
DB search
MRYFLHFAYDGTRYHGWQVQPNTLTVQAEVDRCLSQVLRQPIHSLGSGRTDTGVHASHQV
AHFDADLPAGMTLELLLYRLRRSLPTDIAPLRLHPVADDAHARFSAEERSYEYFVLTPHP
DPFRRDHALHLDRTPDIAAMNEAAAYLVGQFDFTSFSKVKGGVDHYVCYLYEAGWHPAPG
GLVFRIRANRFVRGMVRLVVGTLLEVGRGKMTPRQFQELLWSQRRVDAGGAAPARGLFLS
KVEYGPGVVPEAEG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctactttcttcacttcgcctacgacggcacgcggtaccacggctggcaggtgcag
cccaacaccctcaccgtgcaggccgaggtagaccgctgcctctcgcaggtgctgcgccag
cccatccacagcctgggcagcgggcgcaccgataccggcgtgcacgccagccaccaggtg
gctcacttcgacgccgacttgcccgcgggcatgacgctggaactactgctctaccgccta
cgccggtccctgcccaccgacattgcccccctgcgcctgcaccccgtggccgacgatgcc
cacgcccggttctcggccgaggagcgcagctacgagtacttcgtgctcacgccccacccc
gacccattccggcgcgaccacgccctgcacctggaccgcacgcccgacatagcggccatg
aacgaggccgcggcttacctcgtcgggcagttcgacttcacctcgttctcgaaagtgaaa
ggcggcgtagaccactacgtgtgctacctctacgaagcgggctggcaccctgcgccgggt
gggctggtgttccgcatccgggccaaccgctttgtgcgcggcatggtgcggctggtggtg
ggcacactgctggaagtgggccggggcaagatgacgccgcgccagtttcaggagctgctc
tggtcccagcggcgggttgatgctggtggggctgcgccggcccggggcttgtttctgagc
aaggtggagtacggcccgggcgtggtgccggaagcagaaggctag
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integrated database retrieval system