Hydrogenobaculum sp. SN: HydSN_1349
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Entry
HydSN_1349 CDS
T02516
Name
(GenBank) DNA polymerase III, subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys03030
DNA replication
hys03430
Mismatch repair
hys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HydSN_1349
03430 Mismatch repair
HydSN_1349
03440 Homologous recombination
HydSN_1349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hys03032
]
HydSN_1349
03400 DNA repair and recombination proteins [BR:
hys03400
]
HydSN_1349
Enzymes [BR:
hys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HydSN_1349
DNA replication proteins [BR:
hys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HydSN_1349
DNA repair and recombination proteins [BR:
hys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HydSN_1349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
DNA_pol3_delta
AAA_5
TIP49_C
AAA_19
AAA_30
ResIII
AAA_7
RuvB_N
TIP49
PIF1
AAA_14
Zeta_toxin
AAA_assoc_2
AAA_24
nSTAND3
Mg_chelatase
TFIID_20kDa
Motif
Other DBs
NCBI-ProteinID:
AGH93929
LinkDB
All DBs
Position
complement(1234465..1235751)
Genome browser
AA seq
428 aa
AA seq
DB search
MSYIPFARKYRPKTFKELIGQEIPATILKNAFLYQKIHHAYIFAGHKGTGKTTTARIFAK
VLNCLNPQEGEPCNACPNCQAIEKGTFVDLIEMDAASNRGIDEIRAVKEGASYLPMQGKY
KVYIIDEAHMLTKEAFNALLKTIEEPPPSLIFILCTTEFDKILPTIQSRCQKLVFSRASK
ENIKTYLRRIATQENIEIDEEALDVLSDLADDSMRDAASLLDQASTYGNNKVTIDIVKSM
FGPVDKASIRKFLELLIESDTKEAINMLNTINEKGYNVRLFWEGVYKEIKNILKAFATGE
AEEEFYKKMLEKPLEVFLYLEDIINQGFSAMYQKDPILALEITVLKASLIKDFVPISELL
KEGLDLPTKSAEKKTPNEPIDSKSQKTEDIKAENSKDQEYPEEVEKILEVFKPAKILHYE
KKINHDKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagttatataccttttgctagaaagtacagaccaaaaacgtttaaagagctaataggt
caagagataccagctaccatattaaaaaacgcatttttataccaaaaaatacatcacgct
tatatatttgcaggacacaaagggacaggtaaaaccaccaccgcaaggatatttgcaaaa
gtcttaaactgcctaaatccccaagagggagaaccttgcaacgcttgtccaaactgccaa
gctatagaaaaaggtacatttgtagaccttatagagatggatgccgcttccaacagaggt
atagatgaaataagagccgtaaaagaaggggcaagctatctaccgatgcaaggcaaatat
aaagtttatatcatagatgaagctcatatgcttacaaaagaagcttttaatgcactttta
aaaaccatagaagaaccaccaccttctttgatatttatcctttgtaccacagagtttgac
aagatacttcccaccattcaatcaagatgtcaaaagcttgtgttttcaagagcttcaaaa
gaaaacataaaaacatacctaagacgaatagccacccaagaaaacatcgaaatagacgaa
gaggctttggatgttttatcagatttagcagatgattctatgagagatgccgctagtctt
ttagatcaagctagcacatacggcaacaacaaagtaaccatagacatagtaaaatctatg
tttggaccggtggataaagcatctataagaaagtttttggagcttttaatagaatcagac
acaaaagaagctataaatatgttaaataccataaacgaaaaaggctacaacgtaaggctt
ttctgggaaggagtttacaaagagataaaaaacatactaaaagcttttgccaccggagaa
gccgaagaagagttttacaaaaaaatgttagaaaaacccttagaagtatttttatacctt
gaagatatcataaatcaaggttttagcgccatgtatcaaaaagatccaatccttgctctt
gagataacagtgctaaaagcttctttgataaaagattttgtgcccatttcagagctttta
aaagaaggtttagatttgcccacaaaatccgctgaaaaaaaaacaccaaatgaacctata
gattctaaaagccaaaaaactgaggatataaaagctgaaaactctaaggatcaagagtat
ccagaagaagtagagaaaattttagaagtctttaaaccggcaaagatacttcactatgaa
aagaaaataaaccatgataaaaagtga
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