Idiomarina sp. X4: CWC33_07500
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Entry
CWC33_07500 CDS
T05226
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
idi
Idiomarina sp. X4
Pathway
idi00550
Peptidoglycan biosynthesis
idi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CWC33_07500 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
idi01003
]
CWC33_07500 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idi01011
]
CWC33_07500 (mrcB)
Enzymes [BR:
idi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CWC33_07500 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CWC33_07500 (mrcB)
Glycosyltransferases [BR:
idi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CWC33_07500 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
idi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CWC33_07500 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ATZ73550
LinkDB
All DBs
Position
1566625..1568886
Genome browser
AA seq
753 aa
AA seq
DB search
MIKRQWLSYLFWTSVKIGVAVAAIVAVYAIYLDASLSKHFKTERYQAPALVYAGELRLYP
GYPIQQSALVKTLERIGYNRSNDTEQSGYYSVSNSSVMVHRRPFDFSDGPQMSKRVQVHF
VNDRVASITSWPSGRELESFRLEPELIGRISTLSKEDRLLVGLEVVPNLLIETLLQVEDR
NFYHHKGVSPWAILRALVANLKAGRTVQGGSTLTQQLVKNLYLTREQTLWRKFHEAMMSL
VIDYRFDKNTILETYLNEVYFGQDGRNAIHGIGLASQFYFGKQVQELSVDEVALLIGMIK
GPSYYDPRRFPERAQERRDTVLKVMFDQDLIAKPTYVAAVQRQLDVRESRRLVEHPYPHY
MDIIKREMKTLALPDDWQDTGLKIYTHMDVNAQEAVQKSLAGKLKEDDSALEGAMVVANY
RQGTVTALAGGRLSQTVGYNRAIMALRPIGSLIKPVIYATAMQESGIGLHTPVVDEAITL
EDKQGKQWQPQNYDKEFKGSLLLYEALVESRNIPAVRVGVEVGVDTVVDYMRRLGVVTPL
EAYPSLTLGSASLTPFAVTRMYSALMNDGRFQPLSAISSITTHQGDVLYRASEKNAEQVF
DAKVAYLTKFGLHGVVSEGTASALQRVLAGQKVGGKTGTTNDYRDSWFVAVDGEQVVTAW
LGRDDNQPTGLTGSSGALRVVADYYERKPPLSMALNVPEPLKMQRFHERTGQRIPNDCGN
GELLPAEEIRLPDNITCEGNIEEKSWWDRLFGG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtgataaaacgtcaatggttaagttatttattctggaccagcgtcaagattggcgtggcg
gtcgcggcgattgttgctgtgtatgcgatataccttgatgctagtctgtctaagcatttt
aaaacggagcgctatcaagccccggcgcttgtctatgctggcgagttgcgtttatacccc
ggttacccaatacagcaatcggcactcgttaaaacgctcgaacgcattggctataaccgc
agtaacgataccgagcagtccggctattattcggtgagtaatagcagcgttatggtgcac
cgtcggccgtttgatttctcagacggtccacaaatgtctaagcgggttcaggttcacttt
gtgaatgaccgagttgcatctattacctcatggcccagtgggagagagctggagagcttt
cgtttggagcctgagctcatcggtcgaattagcacgttaagcaaagaagaccggttattg
gttggtttggaagtggtacctaacctactcattgagacgctacttcaggtggaagatcgc
aacttctatcatcataagggggtttctccctgggctattctaagagcgttagtcgcgaac
ttaaaagcgggcagaacggttcaggggggctcgacgctaactcagcagttggttaaaaac
ttgtacctcacccgcgaacaaaccttgtggcgaaaatttcatgaagccatgatgtcgctg
gttatcgactaccgttttgataaaaatactattctggaaacctatttaaacgaagtgtat
ttcggtcaggacggccgcaacgcgattcacggcatagggcttgccagccagttttacttc
ggtaaacaagttcaggagctgtcagttgatgaggttgcgttgctcattggcatgataaaa
ggcccttcttattacgaccccagacgttttcctgagcgtgcgcaggagcgaagggacacc
gtgttaaaggtgatgtttgatcaggatcttatcgctaaaccgacttatgtcgctgcggta
caacgacaattagatgttagagaaagccggcgtttagtggagcatccgtaccctcattac
atggatattattaagcgtgaaatgaaaacgctggcgctgccagatgactggcaggatacg
ggcttaaagatatacacccatatggatgttaacgcccaggaagcggtgcaaaagtcgttg
gcgggcaagcttaaagaggatgacagtgcgctggaaggggctatggtggttgctaattac
cgtcaagggacggtaacggctttagcgggaggacgtttgagtcaaaccgttgggtataac
cgcgcaataatggcgctgaggcccatcggctcgcttattaagccagtgatatacgcaacc
gcaatgcaggagtctggtattggtttgcatactccggtggtcgatgaggccattacactt
gaggacaagcaaggtaagcagtggcaaccgcaaaactacgacaaggaattcaaaggtagt
ttgttgctttatgaggcgttggttgagtcacgtaatattccggcggtgagagtgggcgta
gaagtcggcgtggataccgtcgttgactacatgagacgactaggcgttgtcactcctttg
gaggcctatccgtcgttgacgttgggctctgcgtcgctgacgccgtttgcagtcacacga
atgtacagtgcgctgatgaacgatggacgctttcagccgctctctgcgatttcgtctatt
accacgcatcagggcgatgttttatatcgggcctctgagaaaaatgctgaacaagtgttt
gacgccaaagtcgcttatctgacgaagtttggtttgcacggcgttgtttctgaaggcacg
gcgagtgctttgcaaagagtactggcggggcaaaaagttggcggaaaaaccggtacgacg
aatgattaccgggacagttggtttgtcgctgttgacggcgagcaggtagtgaccgcctgg
ctgggacgggatgataaccaaccgacaggcctgacaggtagcagcggcgccttaagagtc
gttgctgattactacgaacgtaaaccgccgttaagtatggcgttgaatgtacccgaaccg
ctgaagatgcagcgctttcatgaacggacagggcagcgcataccgaatgattgtggaaat
ggcgaattgttgcctgcagaagaaatacgcttgccggataacataacctgtgaggggaat
atcgaggagaaaagttggtgggaccgcctgtttggaggctag
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