Idiomarina loihiensis GSL 199: K734_04100
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Entry
K734_04100 CDS
T02681
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ili
Idiomarina loihiensis GSL 199
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ili03021
]
K734_04100
Transcription machinery [BR:
ili03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K734_04100
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGM35685
LinkDB
All DBs
Position
complement(872858..873436)
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AA seq
192 aa
AA seq
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MSEQVSDQQLVERVQQGDNRAFDLLVKKYQHKVMSLISRYVKQQGDVADVAQEAFIKAYR
ALPNFRGDSAFYTWLYRIAVNTAKNYLVSQGRKPPASDIDAEDAEFYEGAGALRDSASPE
RQMLSDEIRDVVLKTIDELPDDLRRAITLREIEGLGYEEIALEMDCPIGTVRSRIFRARE
AIDNQLRPLLER
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaggtgagtgaccaacagctggtcgaaagagtacaacaaggtgataaccga
gcttttgatctgctggtaaaaaagtatcagcataaagtcatgagtttgatatcgcgttat
gtcaaacaacagggcgacgtagctgatgttgcacaggaagcgtttataaaagcgtatcgg
gcgttaccgaacttccgtggcgacagtgccttttatacctggctgtaccgaattgcggtg
aatacggcgaaaaactatttagtttcgcaaggtagaaaaccgcccgcatctgacattgat
gcagaagacgcagagttttatgaaggagccggtgcgctaagagacagcgcctctccggaa
aggcaaatgctctctgatgagattcgagatgtggtattaaaaacaattgatgaattgccg
gatgatttacgtcgggcaattactttaagggaaattgaaggtctcggttacgaggaaatt
gcgctagaaatggattgtcctataggtactgtccgctctcgcatctttcgcgctcgggaa
gcaatagataatcaactccgaccgttgctggaacggtaa
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