Ipomoea nil (Japanese morning glory): 109161380
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Entry
109161380 CDS
T04663
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109161380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109161380
Spliceosome [BR:
ini03041
]
Complex A
U1 snRNP components
U1 related factors
109161380
Complex B
109161380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
SMODS
Motif
Other DBs
NCBI-GeneID:
109161380
NCBI-ProteinID:
XP_019165290
LinkDB
All DBs
Position
Un
AA seq
1012 aa
AA seq
DB search
MASNSQFTGMQPPRPPLAGPPQNALPPMSMQQQFRPPMAPPQPPPPFIPGPSQQFQPLGH
TNVMMPPPPPSQVQFPQPMPQMHGRPVAGVHNLPSGQVIPPPDFANRPVTPVAAPPQQNF
QISNNYMPGPSGPSLPHSTSYTMDSDSSGTQYPTQTSDPGFAVGGQPWLVTGNPNIKPVN
TPVQSTSELVPKTEESNAAIPEANPQPVSVDKKPSDWTEHTTRNGKKYYYNRRTKISSWE
KPLDLMTAIERADATTDWRECTSPAGKKYYYNKVTKVSKWAMPDELKLAREQIKVEPIKA
LEQEKTGLAHAPDTISFSSAKAYSPKIECSSVLPQGAGASPIPVAPVVTSELSSLPDNAS
NTPSDSVTVQTPTKAASPVVAKSDGHGVSVTPADSVTTQLTTTEISSALDAATNTDGGSP
GKTQEVEKSAGISEKGSASSSDEKMAEASPLVYESKLEAKNAFKALLDSASVGTDWNWDQ
AMRAIINDRRYGALKTLSERKQAFNEYVGQKKKLEAEERRARQKKAREDFKKMLEESKEL
TSSMRWSKAISIFENDERYKAVERAKDREDLFQDYIEELEKKERAKALEENKRNRIEYLE
FLKSCDFIKASSQWRRVQDRLEADERSSRLEKFERLEIFQEYIRDLERDEDEQRKLRMEE
LRKTERKNRDEFRKLMEEHVAEGSLTVRTHWRDYSMKVKDSPAYLAVTSNTTGSTAKDLF
EDVVEELEKQYLDDKARIRDAVKMREISLTSSWTFEDLKAAISVDISSPPISDTNFKVVF
EELMERAKEKEEKEVKRRKRLADDFYELLCDSKEITASSRWEDCKPLLEDRQDRKMNEEG
FLQEVFDKFVSELKEKAKEKERKRRDEKARKEKDRKDGEKKEKHGREKDRGDESSRGGKD
RGARKESTDSDKTESYSIEDTRRTGSDRDKKHRKRHSSSMDDASVDEGEKDRSRSSHRHS
SDHKKSKQGEQHGWETKAEGQHKKHKRDHRTSSHRSGEYEEDYKDGEDGEVR
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaactctcagttcactggcatgcagccacctcgacctcctctagctggtcct
cctcaaaatgctcttccacctatgtcgatgcaacagcagttccgaccacccatggctcca
ccacagccgccaccgccatttattcctgggccgtcacaacaatttcagcctcttggacat
acaaacgttatgatgcctcctcctcccccttcacaagttcagtttcctcaacccatgcca
cagatgcatggtcgacccgttgcaggagtgcacaatctgccttcggggcaggtaattccg
ccacctgattttgcaaacaggcctgtcacacctgttgcagcaccgcctcaacagaacttt
caaatttcaaataactatatgcctggtcctagcggcccaagtttgcctcattctacttcc
tacacgatggattcagattcttctggaacacaatatccgacacaaacaagtgatcctggt
tttgccgttgggggacaaccatggttggtaactgggaaccctaacataaaacctgtaaac
acacctgtgcagtcgaccagtgaacttgtgccaaaaacagaagaaagtaatgctgctatt
ccggaagcaaatcctcaacctgtctctgtagataagaagccatcagattggacagagcat
actacccgtaatggcaagaaatattactacaacagaaggacaaagatctctagctgggag
aaacctctggatttgatgactgcaattgagagggctgatgcaaccactgactggagagaa
tgtactagtcctgctggcaaaaagtactactacaacaaggttaccaaggtgtcgaaatgg
gcaatgcctgatgagttaaagttggctcgtgagcagatcaaggtggagccgatcaaggca
ttagaacaagaaaagactggtctcgctcatgctccggatacaatatctttttctagtgcc
aaagcatattctccaaaaatagagtgttcatcagtcttacctcaaggagcaggggcaagc
ccaataccagtggcaccggtagtcacttcagaattgtcaagcctacctgataatgcatct
aacaccccaagtgactcggttactgtgcagactcctaccaaagccgcctcaccagttgtt
gccaagtcagatggacatggagtgtcagtaacaccagctgattcagtcacaacacagttg
actactactgagatttcatcagctcttgatgctgcaactaatacagatggaggttctcca
ggaaagacacaggaagttgaaaaaagtgctggaatttctgaaaagggaagtgcttcttca
tcagacgagaaaatggctgaggcatcacccttagtttatgagagcaaactggaagcaaag
aatgcatttaaagctcttctagattctgcaagtgtcgggactgactggaactgggatcag
gccatgagagcaataattaatgatagaagatatggtgctctaaaaacactttctgagcgg
aagcaggcttttaatgagtatgtgggacaaaagaaaaaacttgaagcagaggagaggcgt
gccagacagaaaaaagcacgagaagatttcaaaaagatgttagaagaatccaaagagcta
acatcttccatgagatggagtaaagcaatatctatctttgaaaatgatgaacgttataaa
gctgttgaacgagcaaaggaccgtgaggatctttttcaagattacatagaagaacttgaa
aaaaaggaaagagcaaaggcattggaggagaacaagcgcaatagaatagaatacttggaa
tttttgaaatcctgtgacttcattaaggcaagcagtcaatggcggagggtccaagaccgc
ttagaggctgatgaaaggtcctcacgccttgagaaatttgagcgcttggaaatatttcag
gagtatatacgtgatttagagagggatgaagatgagcaaaggaagttgcgaatggaggag
ttgaggaaaacagaacgtaaaaaccgtgacgagtttcgcaaactaatggaagagcatgtt
gctgaaggttctcttacagtcagaactcactggcgtgactatagcatgaaggttaaagat
tcacctgcatatcttgctgtaacatccaacaccacagggtccacagcaaaagatttgttt
gaagatgttgtagaggagctggagaagcagtatctcgatgacaaggcccgtataagagat
gcagttaaaatgcgtgagatttctctgacatcaagctggacctttgaagacttaaaggct
gcaatttcagtagatattagctcgccacctatatcagatactaacttcaaggttgttttt
gaagagctgatggaaagggccaaggaaaaagaagaaaaagaagttaaaagacgtaaacgt
cttgcagatgacttctatgaacttttatgcgattctaaggaaatcactgcatcgtcaaga
tgggaggactgtaaaccattactcgaggacaggcaagacaggaagatgaatgaagagggc
tttttgcaggaggttttcgataaatttgtttcagaactaaaagaaaaggctaaagagaag
gaaagaaaacgtcgggatgagaaggctaggaaggaaaaagacaggaaagacggggaaaag
aaagaaaaacatggaagggaaaaagatagaggagatgaaagcagccggggaggcaaagat
aggggggctagaaaagaaagtaccgacagcgataagacagaatcatacagtatcgaagac
accagaagaaccggaagcgacagggacaagaaacaccgaaagcgacattccagttccatg
gacgatgcaagtgtagacgaaggcgaaaaggatcggtcaaggagctctcaccgccacagt
agtgaccacaagaagtcgaaacagggggagcagcatggatgggaaacgaaagccgagggg
cagcacaagaaacacaagagagatcacaggaccagttctcatagaagcggcgaatatgag
gaggattacaaggatggcgaggacggggaagtgcggtag
DBGET
integrated database retrieval system
