Ipomoea nil (Japanese morning glory): 109170471
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Entry
109170471 CDS
T04663
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109170471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109170471
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
109170471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box
F-box-like
LRR_8
Motif
Other DBs
NCBI-GeneID:
109170471
NCBI-ProteinID:
XP_019175140
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All DBs
Position
Un
AA seq
364 aa
AA seq
DB search
MGVEDLCFDKLMVSNSCSSDGRVGGIMIKEWKDIPMELLLRIVSLVDDRTVIVASGVCCG
WRDAISWGLTQLSLSWCKKNMNNLVLSLVCKFTKLRVLILRQSLPQLQDNAVEAIANRCH
ELQELDLSKSFKLTDRSLYALAHGCPNLKKLNISGCTAFSDNGIAYLSEHCRKLEVFNLC
GCVKGATDKALKAIGYYCNRLQSVTLGWCEKVSDEGVMSLAYGCPDLRALDLCGCVLITD
ESVIALANNCPHLRSLGLYYCQNITDRAMYSLAQSRAKKHKHEIWQSMKKSRYEEEGLMN
LNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACAVQAHRAHTAVP
HTAH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggggttgaggacttgtgctttgacaagttgatggttagcaatagctgtagtagtgat
ggtagggtggggggaattatgatcaaggagtggaaggacataccaatggagcttctgttg
aggattgtctctctggtggatgatcggacggttattgtggcttctggagtttgctgtggc
tggagagatgccatttcttggggtctcacccaactttccctttcttggtgcaagaaaaac
atgaacaatttggttttatcgctcgtttgcaagttcacaaagctgagggttctaattctg
cgacaaagcttaccacaacttcaggataatgctgttgaggcaattgcaaatcgctgtcat
gaactgcaagagctagatctgagcaagagctttaagctgactgaccgctctctatatgcg
ttggcccacggttgtccaaacctcaagaagctaaacataagtgggtgcacggctttcagt
gataatggaattgcatatctttctgagcactgcaggaaactggaagtctttaatctctgt
gggtgcgttaaaggagccactgataaggcattgaaggctattggatactactgcaaccgc
ttgcagtctgtaactctggggtggtgtgagaaagtcagtgatgaaggcgtgatgagtttg
gcttatggttgccctgatctgagagcccttgacttgtgtggctgtgttcttataacagat
gaaagcgtaattgcgttggcaaacaactgtcctcacctgagatcccttgggctgtactac
tgccagaacataacggatagggcaatgtactctctggctcaaagtcgtgccaaaaagcac
aagcacgagatttggcaatccatgaagaagagcaggtacgaggaagaagggctgatgaat
ctgaacatcagccagtgcacagccctcacccctccggctgttcaggcagtttgcgactcc
ttccctgctctccatacttgcccaggccgtcattccctcattataagcggttgtctgagc
ctgacatcagtgcattgcgcctgcgcggtgcaagcacaccgtgcacacactgcagtgcct
cacacggctcattaa
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