KEGG   Ipomoea nil (Japanese morning glory): 109191691Help
Entry
109191691         CDS       T04663                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ini00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    109191691
Enzymes [BR:ini01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109191691
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     109191691
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1158 aa AA seqDB search
MAASSGGEDIKFSVVVSMFQWIHKSKSKPLKQSKFRKFLDTFCRKPHDYFAAMRLILPGL
DRDRGSYGLKEHVLATCIIDALGISRDSDDAHRLLNWRKAGPRAGLNAGNFSLVAAEVLQ
RRQGVSSGGLTIKELNDLLDALASSVNRSEKTTVLSDLIRRTNAQEMKWIVMIILKDLKL
GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLALRVSN
AAAAWKKLHGKEVVVECKFDGDRIQIHKNKAEMHFFSRNFFDHQEYAHAMSDIIAQNILV
EKCILDGEMLVWDTSANRFAEFGSNQEIAKAAREGLDSDRQLCYVAFDVLYVGDTSVIHQ
SLKERHELLRKVVKPIKGSLEILVPNGGLNAHRAPGELCWSVVGHGVDDVEKFFKATVEN
RDEGIVLKDLNSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRHGGKVAQFLV
GISERPSPGTYPRRFISFCRVGTGLSDEELDAVVTRLKPYFRKYEYPKQTPPSFYQVTNS
SKERPDVWVESPEKSIIVSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQT
FVELVHSSNGTTQRGAYSGRVKDHEPKHIKSKSRERKNALVVPSHFIQTDVSHIKGETSI
FSNMVFYFANVPSSHTLDSLHKMVVEHGGTFSMNLNNSVTHCIAAESRGIKFQAAKLRGD
VVNCSWLFDCCSQKRLLPLHPKYFLFLSDATKKKLQEEVDEFSDSYYSNLNIDDFKQLLS
SICRSEKSKTVEYYKKKYCPKDKWCCFHYCSIHFFLHMHSSKSLDQKVLLELAMRRLKLE
VSMGGGKVSDDLFHATHLVIISLPEFCVDFDTLLRSFSVSEGRVMCSNKLHVVGSQWLED
CFEKNQKLPEGSYSLKPKNFEASAIKESESESMVEDHMGKHVIPSSTAKNVGTEKEVALE
ESTVNMLPKRDGKRKRRASGRSTTRGRGKASIIKQPRRTKFGSKPARIDENESSESDGSR
GIRQNKFGGSDNEENFEFKRWNGENISNHDPEIPVEYVIEDSKPLTEGKEIVEECIDKNG
VGGEWNASKTLSQNPLDPVQSILLNMIPSLEKTSSSTSTSMDMGLEQEKPPPPLDLTPNP
IKKKKVSYKDAVAALLKD
NT seq 3477 nt NT seq  +upstreamnt  +downstreamnt
atggcggcgagcagtggtggcgaagacatcaagttcagcgtggtggtgagcatgttccag
tggatacacaagagcaaatccaagccgctaaaacagtccaagttccgaaagtttctggac
actttctgccggaagcctcatgactacttcgctgcaatgcggctcatcctccctggcctc
gaccgcgatcgcggctcctatggtctaaaagagcacgtgcttgccacctgcatcatcgac
gccctcggcatatcccgcgactccgacgacgcccaccgcctcctcaactggcgcaaggct
ggccctagagctggcctcaatgctggaaatttctcccttgtagccgctgaggtcctacag
cgcaggcagggagtgtcttctggtgggctaacaataaaagaattaaacgatttgcttgat
gccttagcttcaagtgtgaacagatctgagaagactactgttctttctgacctcattagg
agaacaaatgctcaggaaatgaagtggattgttatgataattctcaaagatcttaagttg
ggaattagtgaaaaaagcatctttcatgaattccatccagatgcagaagacttgttcaac
gttacttgcgacttaaaacttgtctgtgaaaagttaagagatagaaatcaacggcataag
cgccaggatattgaagttggaaaagcggtgcgccctcaactagctcttagggtcagcaat
gcagctgctgcatggaagaagctccatggaaaggaagtagttgttgagtgcaaatttgat
ggggatcgcatccagattcataaaaacaaagcagagatgcacttcttctctagaaacttt
tttgatcatcaagagtatgcacatgcaatgtcagatatcattgcacagaatattcttgtg
gagaaatgtatacttgatggtgaaatgttagtctgggacacatctgcaaatcgttttgca
gagttcggttcaaatcaagaaatagcaaaggctgcaagggaaggacttgatagtgacagg
cagttatgctatgttgcctttgatgttctttatgttggagataccagtgttattcaccaa
agtttgaaagaacgacatgagcttctacgtaaggttgtgaagcctattaaaggtagcttg
gagattttggttcctaatggtggccttaatgctcatcgtgctcctggagagctatgctgg
tcagtcgttggtcatggtgtagatgatgttgagaagttttttaaagcaactgttgaaaac
agagatgaaggaattgttctaaaagaccttaattcaaaatgggagcctagtgaccggagt
ggaaagtggctaaagttgaaacctgagtatattcgggctggctctgatttggatgttctt
atcattggaggttattatggatctggacgtcatggtgggaaggtggcacaatttttggtg
ggtatttcggagcgtccatctcctggcacatatccaagaagattcatttctttctgcaga
gtgggcacgggactctctgatgaagagcttgatgctgttgtgactagattaaaaccatat
ttcaggaaatatgaatacccaaagcagacaccacctagcttctatcaagtaacaaacagt
tcaaaagaaagaccagatgtctgggtggagagcccagaaaaatcaataattgtttctatc
accagtgatattcgaacaataagatctgaggtgtttgctgcaccatacagcttgagattt
ccacgtattgaccgggttagatatgacaagccttggcatgagtgtcttgatgtgcaaact
tttgttgaattggtacattcaagcaatggtaccactcaaagaggggcatactccggaagg
gtgaaggatcatgaaccaaagcatatcaagtctaagagccgtgagaggaagaatgcatta
gttgttccttctcatttcatacagacagatgtctctcatattaagggtgaaacatcaata
ttttcaaacatggtattttactttgctaatgtgccttcatcacatactctggattccttg
cacaaaatggttgttgaacatgggggcactttctcaatgaatttgaataattcagtcact
cattgcattgcagctgaaagtagagggatcaagtttcaggctgcaaagcttcggggagat
gttgttaattgctcttggctctttgactgttgttcacaaaaaaggctccttcctctacat
ccaaagtacttccttttcctttctgacgcaacaaagaaaaagttacaagaagaagttgat
gagttctctgattcttactacagtaacctcaatattgatgattttaaacagctcttgagc
agcatatgtcgatctgaaaagtctaaaactgttgaatactataagaagaaatattgtcca
aaggataaatggtgttgttttcattattgcagcattcactttttccttcatatgcactct
tcaaaaagtttggatcagaaggttttattggagcttgcaatgaggagattgaagcttgaa
gtttccatgggaggtggcaaagtttccgatgatcttttccatgctacccatctggttatc
atttcccttccagaattctgtgtggactttgacacattgttgaggagcttttctgtatca
gaggggcgtgttatgtgcagtaacaaactgcatgtagtggggtcacaatggttagaagat
tgttttgagaaaaaccagaagttgcctgagggtagttatagtctgaagcccaagaatttt
gaagcatctgccattaaagagagtgaaagtgagtccatggttgaagaccatatgggcaag
catgttataccatcttccacagctaaaaatgtgggaacggaaaaagaagtggctttggag
gagtcgactgtgaacatgttgcctaagagggatggcaaaagaaaacggagagctagtggt
agaagcacaactagaggtagagggaaagcaagcatcatcaaacagccacgaagaacaaag
tttggaagcaaaccagctaggatagatgagaatgaatcaagtgaaagtgatggttcacgg
ggaattaggcaaaataaatttggggggagtgataatgaagaaaactttgaattcaagaga
tggaatggtgaaaatataagcaatcatgatccagaaatcccagtggaatatgtaattgaa
gattcaaagccgctgacggaaggcaaagaaattgttgaagagtgtatagacaagaatggt
gttggaggagaatggaatgctagcaaaaccttatctcaaaaccctctcgatccagtccaa
tcaattttattgaatatgataccaagccttgagaagacatccagcagcaccagcaccagc
atggatatgggtcttgagcaagaaaagccgccaccacctttagatctcacaccaaatcca
ataaagaagaagaaagtgagctacaaggatgcagtagctgcattgctcaaggattag

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