Isosphaera pallida: Isop_1573
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Entry
Isop_1573 CDS
T01407
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ipa
Isosphaera pallida
Pathway
ipa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ipa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Isop_1573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipa03019
]
Isop_1573
03110 Chaperones and folding catalysts [BR:
ipa03110
]
Isop_1573
03029 Mitochondrial biogenesis [BR:
ipa03029
]
Isop_1573
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipa04147
]
Isop_1573
Enzymes [BR:
ipa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Isop_1573
Messenger RNA biogenesis [BR:
ipa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Isop_1573
Chaperones and folding catalysts [BR:
ipa03110
]
Heat shock proteins
HSP60 / Chaperonin
Isop_1573
Mitochondrial biogenesis [BR:
ipa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Isop_1573
Exosome [BR:
ipa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Isop_1573
Exosomal proteins of other body fluids (saliva and urine)
Isop_1573
Exosomal proteins of breast cancer cells
Isop_1573
Exosomal proteins of colorectal cancer cells
Isop_1573
Exosomal proteins of bladder cancer cells
Isop_1573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADV62157
UniProt:
E8QZM1
LinkDB
All DBs
Position
complement(2279686..2281308)
Genome browser
AA seq
540 aa
AA seq
DB search
MPKQLMFAESARRKLFEGVDVLAHAVGTTLGPTGRNVIVNKSFGGPAVTKDGVTVSKEIE
LPDPFQNMGAKLANVVASKTSDVAGDGTTTATILARALYREGLKSISSGANPMAVRRGIE
KAVEAAVAELGKLSREVSNRDQIAQVGTISANHDKAIGEMLADAVERVGQDGVITVEEGK
TSETRLEFVEGMQFDKGYLSPYFVTNPTSMECVLEDPYILLHEKKISNIRDLIPLLEKVA
QKARPLLIIAEDVEGEALATLVVNKLRGVLNVAAVKAPGFGDRRRAMLQDMAILTGGTVV
SEDLGLKLENLQIDQLGQAKQVIVDKDSTTIINGLGSKEEIQRRIAQLKRQIEETESEYD
REKFQERLAKLSGGVALIQVGAATEAEMKELKARVEDALHATRAAAAEGIVPGGGVALLR
TIPAVEKVRDSLEGDERIGAGIVLRALEEPIRHIAANSGYDGGVVADEVKARGGSIGFNA
NTGEYVDLYEAGIIDPTKVTRSALQNAASIAALMLTTEVMITSIKEDEEKNAKGIEGVVR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaagcaattgatgttcgccgagtcggcccggcgcaagctgtttgagggagtcgac
gtgttagcccacgcggtcgggaccaccttgggaccgaccgggcgcaacgtgattgtcaac
aagtcgttcggcggtcccgccgtcaccaaagacggcgtgacggtctccaaggaaatcgag
ttgcccgaccccttccaaaacatgggggccaaactcgccaacgtggtggcgagcaagacc
tccgacgtggccggcgacggcaccaccaccgcgaccattctggcccgcgcgctgtaccgc
gaaggtctcaagtcgatctcctcgggagccaacccgatggcggtgcgccgcggcatcgag
aaggcggttgaagcggcagtcgccgaactgggtaagctctcccgcgaggtgtccaaccgc
gaccaaatcgcccaggtcggcaccatttcggccaaccacgataaggccattggtgaaatg
ctcgccgacgctgtcgaacgggtcggtcaggacggcgtcattaccgtcgaggaaggcaag
acctccgagacccgactggagttcgtcgaggggatgcagttcgacaagggctacctgtcg
ccctactttgtcaccaatcccacctcgatggagtgcgtgctggaagacccgtacattttg
ctccatgagaagaagatcagcaacatccgcgacctaatcccgctgctggagaaagtggcc
cagaaggctcgtccgctgctgatcatcgccgaggatgtcgagggcgaagcgctggcgacc
ctcgtggtcaacaagcttcggggcgtcttgaatgtcgccgccgtcaaggctcctggcttc
ggcgatcgccgtcgcgctatgcttcaagacatggcgatccttaccggaggcaccgtggtc
agcgaggacctcggcctcaagctggaaaatctccagatcgaccagcttggtcaggccaag
caggtgattgttgacaaagattcgaccaccatcatcaacggtctgggctcgaaggaggaa
atccaacggcggatcgcccaactcaagcgtcagatcgaggagaccgaaagcgaatacgac
cgcgagaaattccaagagcgtctcgccaagctctccggcggcgtggcgttgattcaggtc
ggcgcggccaccgaggccgagatgaaggaactcaaggcccgcgtcgaggacgctttgcac
gccacccgcgccgccgctgccgaagggatcgtgccgggcggcggggtggccctactgcgg
accattccggccgtcgagaaggtgcgcgactccctagaaggggacgaacgcatcggcgcg
gggatcgtcctgcgagcccttgaggagccgatccgccacatcgccgccaactccggttac
gatggcggcgtggtcgccgacgaggtcaaggcccggggcggttcgatcgggttcaacgcc
aacaccggcgagtacgtcgatctctacgaagccgggatcatcgaccccacgaaggtgacc
cgttcggcgctccaaaacgctgcttcaattgccgccttaatgctcaccaccgaggtgatg
atcaccagcatcaaggaggacgaggagaagaacgccaaggggatcgagggcgtggtccgc
taa
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