Ictalurus punctatus (channel catfish): 108258101
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Entry
108258101 CDS
T04658
Name
(RefSeq) elongator complex protein 3 isoform X1
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108258101
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
108258101
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108258101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
108258101
NCBI-ProteinID:
XP_017311971
Ensembl:
ENSIPUG00000008133
UniProt:
A0A2D0Q2Q7
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Position
25:12570533..12597108
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AA seq
551 aa
AA seq
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MDVSGDDKPLSDLSRAELMMMTIADVIKQLVEAHEQGKDVNLNKLKTKTSAKYGLSAQPR
LVDIIAAVPPQYRRALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGP
DSDFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMA
LPEDYRDYFIRNLHDALSGHTSNNVAEAVRYSERSNTKCVGITIETRPDYCLKRHLSDML
AYGCTRLEIGVQSVYEDVARDTNRGHTVRAVCESFHLAKDAGFKVVSHMMPDLPNVGIER
DVEQFIEFFENPAFRPDGLKLYPTLVIRGTGLYELWKTGRYKSYSPSTLVDLVARILALV
PPWTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVR
PYQVELIRRDYAANGGWETFLSYEDPEQDILIGLLRLRRCSPQSFRPELKTAVSIVRELH
VYGSVVPVSSRDPSKFQHQGFGMMLMEEAERIARDEHGSAKLAVISGVGTRNYYRKMGYE
LEGPYMVKRLD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctggtgatgacaaacctctaagtgacctgagccgggctgaactgatgatg
atgacgattgcagacgtcatcaaacagttggttgaggctcatgagcaggggaaagatgtc
aaccttaacaagttgaagacaaagacctcggcgaaatatggcctctcagcacaaccacgg
ctagtagacatcatcgctgcggtgccaccccaataccgacgagcactcgtgccaaaactg
aaagccaaacccattcgcacagccagtgggatcgctgtcgttgctgtgatgtgcaagccc
catcgctgtcctcacatcagcttcacaggaaacatttgtgtatactgtccaggtggacct
gactctgattttgaatattcgacacagtcttacacaggctatgagccgacgtctatgagg
gccatccgagcacgctatgatccctacttacagacaagacacagggtggaacagctgaag
cagctgggccacagcgtggataaggtggagtttattgtgatgggcggcacattcatggct
ctgcctgaggactacagagattacttcatccgcaacctgcacgatgcactgtcaggacac
acgtccaacaacgtagccgaggccgtcaggtactcggagcgcagtaacactaagtgcgtg
gggatcaccatcgagacgcggccagactactgcctgaagaggcacctgagtgacatgctg
gcgtacggctgcaccaggctggagatcggcgtgcagagcgtttacgaagacgtggctcgt
gacaccaacagggggcacacggtgcgagctgtgtgcgagtcttttcatctggctaaagac
gcaggctttaaggtggtgtcccacatgatgcctgacctgcccaacgtgggcatagagcga
gacgtggagcagtttatagagttcttcgagaatccggcattccggccagacggcctgaag
ctttaccctacattagtgatccggggaacaggcctgtatgagctgtggaagactggccgc
tacaagagctactcacccagcactctggtggatctggtggcccgcatcctggcgctggtg
ccaccctggactcgagtgtaccgtgtgcagagggacatccccatgccgctggttagctct
ggcgtggaacacggaaacctgcgagagttggcactggcccgaatgaaggacatgggaacc
gagtgccgagacgtgagaaccagagaggtgggaatccaggagatccatcataaagtgcga
ccataccaggtggagctgatccgacgagactacgcggccaacggaggctgggagacgttc
ttgtcgtacgaggatcccgaacaggacatcctgatcgggttgctgaggctccgccgctgt
tcaccgcagtcttttcggccggagctcaagaccgccgtgtcgatcgttcgcgagctgcac
gtgtacggcagcgtggtgcccgtcagcagccgagatcccagcaagttccagcaccagggt
ttcgggatgatgctgatggaggaggcggagaggatagccagagatgaacacggctccgcc
aaactcgccgttatctcaggtgtagggactcggaattattacaggaagatgggttacgag
ctggaggggccgtacatggtgaaacgcctggactga
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