Ictalurus punctatus (channel catfish): 108279384
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Entry
108279384 CDS
T04658
Symbol
tgfb1b
Name
(RefSeq) transforming growth factor beta-1 proprotein
KO
K13375
transforming growth factor beta-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04068
FoxO signaling pathway
ipu04110
Cell cycle
ipu04148
Efferocytosis
ipu04218
Cellular senescence
ipu04350
TGF-beta signaling pathway
ipu04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108279384 (tgfb1b)
04350 TGF-beta signaling pathway
108279384 (tgfb1b)
04068 FoxO signaling pathway
108279384 (tgfb1b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108279384 (tgfb1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108279384 (tgfb1b)
09143 Cell growth and death
04110 Cell cycle
108279384 (tgfb1b)
04218 Cellular senescence
108279384 (tgfb1b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
108279384 (tgfb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108279384 (tgfb1b)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108279384 (tgfb1b)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108279384 (tgfb1b)
Chaperones and folding catalysts [BR:
ipu03110
]
Intramolecular chaperones
Others
108279384 (tgfb1b)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Transforming growth factors (RSTK binding)
108279384 (tgfb1b)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108279384 (tgfb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
DUF5110
Motif
Other DBs
NCBI-GeneID:
108279384
NCBI-ProteinID:
XP_017349101
Ensembl:
ENSIPUG00000002511
UniProt:
W5UHQ2
LinkDB
All DBs
Position
18:complement(18663515..18675182)
Genome browser
AA seq
380 aa
AA seq
DB search
MRAQSLLLALLCLMGCVGYCGTLSTCKPLNLELVKRKRIEAIRGQILSKLQLAKEPEDDD
EGEEDEVPAEVLSVYNSTVDLSEELMQNTKHVDSFAAEEEAYYAKEVHKFNMTRIMNKMV
MLFDVSAMKGVLGSNRIVSQAELRLLIRDPTIAPGNQQRLELYEGDGDKAQYLNSQFITS
EFNSKWISFDVTQTVKNWLKNPEKEKALEVKLHCGCGEKEKKMPFHISGIYSERGDKEAL
LAKMTKPYILVMSLPADRVHEVSSRRKRQATGDADCSEQSDICCVRRLYIDFRKDLGWKW
IHQPSGYYANYCIGSCSFVWNTENKYSQVMALYKHHNPGASAQPCCVPQVLEPLPILYYV
GRQHKVEQLSNMIVKTCKCS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagggcacagagtttgctgttggcactgctgtgcctgatgggatgtgtgggatactgt
ggaaccttgtcaacctgcaaacccctgaacctggagctggtgaaaaggaagcgcatcgag
gctatccgtggacagatcctcagcaaactacagctggccaaagagccagaagacgacgac
gaaggagaggaagatgaggtgcctgcagaggtcctgtctgtctacaacagcactgtggat
ttgagtgaggagctgatgcagaacaccaagcatgtggattcttttgctgcagaggaggag
gcatactatgccaaggaagttcataagtttaacatgactaggattatgaataaaatggtg
atgctgtttgacgtcagtgcaatgaaaggagttttgggctcaaaccgtattgtttcccag
gctgagctccgtcttctcatcagggaccctacaatagctcctggcaatcagcagaggtta
gagctttacgaaggggacggggacaaggctcagtacctgaattcacaatttatcaccagt
gagttcaacagcaaatggatatcctttgatgtgacacagactgtgaaaaactggctgaaa
aatcctgagaaggaaaaagcattagaggtgaagttacattgtgggtgtggggagaaagaa
aaaaagatgcctttccacatttcaggcatatacagtgagagaggagacaaagaagctcta
ctagccaaaatgacaaagccatacattctggtaatgtcacttcctgcagaccgtgtccat
gaggtcagctcgcggaggaaacggcaagctacaggagatgcagattgttctgagcagtca
gatatttgctgtgtgagaagactttatatagacttccgtaaagacctaggttggaaatgg
atacaccaaccctccggctattatgcaaactactgtatcggctcctgttcgtttgtctgg
aacacggaaaataagtactcacaggtgatggcgctgtataaacatcacaatcctggagca
tcagcccaaccctgctgtgtgccgcaggtcctggaacctttacccatcctgtactatgtg
gggaggcaacataaggtagaacagctgtcaaatatgatcgtcaagacttgcaaatgtagc
tga
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