Isoptericola variabilis: Isova_0831
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Entry
Isova_0831 CDS
T01520
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
iva
Isoptericola variabilis
Pathway
iva03420
Nucleotide excision repair
iva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Isova_0831
03430 Mismatch repair
Isova_0831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_0831
Enzymes [BR:
iva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Isova_0831
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Isova_0831
MMR (mismatch excision repair)
Other MMR factors
Isova_0831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
GIDA_C
PrkA
Sulfotransfer_3
Motif
Other DBs
NCBI-ProteinID:
AEG43617
UniProt:
F6FXB4
LinkDB
All DBs
Position
903630..905672
Genome browser
AA seq
680 aa
AA seq
DB search
MSLASNTTVASVHPDAVLDALDPEQREVALALTGPVCVLAGAGTGKTRAITHRIAYGVRS
GAYKPTSVLAVTFTARAAGEMRTRLRELGVVGVQARTFHAAALRQLGYFWPRVVGGAPPQ
ILEHKASAVAEAARRIGVSVDRVAVRDLSSEVEWAKVSLVVAEDYVKAALADDRPAPSGY
DHQTVARLLTAYEDVKTERGVIDFEDVLLMLADMLSSHPQVAEEVRSQYRHFVVDEYQDV
SPLQQFLLDQWLGGRRELCVVGDPSQTIYSFTGATPHYLLDFTRTYPDAQVIRLVRDYRS
TPQVVHLANEVLRRGRVAGALELRAQRPAGPPVSFTVYDDDEAEAAGIAARAGRLVADGV
RPSEIAVLYRTNAQSEAFEAALADAGISYQVRGGERFFQRKDVRDAVVLLRGAARSADGD
QPMPELVRDVLTSAGWSERPPAARGAARERWEAMNALVGLADDLARAGTDEQPATLATLV
AELEERAAAQHAPTVEGVTLASLHAAKGLEWDAVFLAGMSEGLMPISLAETDQAVAEERR
LLYVGVTRARVHLEVSYARSRNPGGRASRKRTRFLDGLWPDEPRGRTAGPGTRRRGQARQ
QLTGEADVELFDALREWRLSVARETDKPAYTILGDATLAEIAEVRPSSIAQLARINGIGP
AKIDRYGATILALVADAGSP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgcctccaacacgactgttgcctcggttcatcccgacgccgtcctcgacgcc
ctcgaccccgagcagcgcgaggtcgcgctcgcgctgaccggccccgtctgcgtgctcgcg
ggcgcgggcacgggcaagacgcgcgcgatcacgcaccgcatcgcctacggcgtgcgctcg
ggcgcgtacaagccgacgtcggtgctcgccgtgacgttcaccgcgcgagcggcgggggag
atgcgcacgcggctgcgcgagctcggcgtcgtgggtgtccaggcgcgcaccttccacgcc
gccgcgctgcgccagctcggctacttctggccgcgcgtcgtcgggggcgccccgccgcag
atcctcgagcacaaggcttccgcggtggccgaggccgcccgccgcatcggcgtgagcgtc
gaccgcgtcgcggtgcgcgacctgtcgtccgaggtcgagtgggccaaggtctcgctcgtc
gtcgccgaggactacgtgaaggcggcgctcgcggacgaccgtcccgcgccgtcgggctac
gaccaccagacggtcgctcgcctcctgacggcctacgaggacgtcaagaccgagcgcggc
gtgatcgacttcgaggacgtcctgctcatgctcgcggacatgctgtcctcgcaccctcag
gtcgccgaggaggtccgctcgcagtaccggcacttcgtcgtcgacgagtaccaggacgtc
tcgccgctgcagcagtttctgctcgaccagtggctcggcgggcggcgcgagctctgcgtc
gtcggggacccgtcgcagacgatctactcgttcacgggcgcgacgccgcactacctgctg
gacttcacgcgcacctacccggacgcccaggtgatccggctcgtgcgcgactaccgctcg
acgccgcaggtcgtgcacctggcgaacgaggtgctgcgccgcggccgcgtcgccggtgcg
ctcgagctgcgcgcgcagcggccggcggggccgcccgtgtcgttcaccgtgtacgacgac
gacgaggcggaggccgccgggatcgccgcgcgcgcggggcggctcgtcgcggacggcgtg
cgcccgtccgagatcgccgtgctgtaccggaccaacgcgcagtcggaggcgttcgaggcc
gccctcgccgacgcgggcatctcctaccaggtgcggggcggcgagcggttcttccagcgc
aaggacgtgcgcgacgcggtcgtgctgctgcgtggcgcggcccgctcggccgacggagac
cagcccatgcccgagctggtgcgcgacgtgctcacgtcggccggctggtcggagcgcccg
cccgcggcccgcggcgccgcccgcgagcgctgggaggccatgaacgcgctcgtgggcctc
gccgacgacctggcgcgcgccggcaccgacgagcagcccgcgacgctggcgaccctcgtc
gccgagctcgaggagcgcgccgccgcgcagcacgcgccgaccgtcgagggcgtcacgctc
gcgtcgctgcacgccgccaaggggctcgagtgggacgcggtgttcctcgccggcatgagc
gaggggctcatgcccatctcgctcgcggagaccgaccaggcggtcgccgaggagcgacgc
ctcctctacgtgggggtcacgcgcgcccgcgtgcacctcgaggtctcgtacgcgcgctcg
cgcaacccgggcggccgcgcgtcgcgcaagcgcacgcgcttcctcgacgggttgtggccc
gacgagccgcggggccgcacggccgggcccggcacgcgccggcggggccaggcgcgccag
cagctcacgggcgaggcggacgtcgagctgttcgacgccctgcgcgagtggcgcctgtcc
gtcgcacgcgagaccgacaagcccgcctacacgatcctcggggacgcgacgctcgccgag
atcgccgaggtccggccgtcgtcgatcgcgcagctggccaggatcaacggcatcggaccg
gccaagatcgaccgctacggggcgacgatcctggccctcgtcgccgacgccggaagcccc
tga
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