Janthinobacterium sp. B9-8: VN23_07210
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Entry
VN23_07210 CDS
T04271
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00260
Glycine, serine and threonine metabolism
jab00460
Cyanoamino acid metabolism
jab00630
Glyoxylate and dicarboxylate metabolism
jab00670
One carbon pool by folate
jab00680
Methane metabolism
jab01100
Metabolic pathways
jab01110
Biosynthesis of secondary metabolites
jab01120
Microbial metabolism in diverse environments
jab01200
Carbon metabolism
jab01230
Biosynthesis of amino acids
jab01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VN23_07210 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VN23_07210 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VN23_07210 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VN23_07210 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VN23_07210 (glyA)
Enzymes [BR:
jab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VN23_07210 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AMC34404
UniProt:
A0A0X8GLX4
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Position
complement(1597261..1598508)
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AA seq
415 aa
AA seq
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MFSKSATIAQYDPDLAAAIAGEVVRQHEHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRFYGGCEFVDTVEQLAIDRVKALFGAEYANVQPHSGSQANQAVYFSILKPGDTVMGMN
LGHGGHLTHGSPANLSGKLFNIVAYGLNENEEIDYDDMERVALETKPKLLIGGASAYALR
FDWARMREIADKVGAYFMVDMAHYAGLIAAGVYPNPVPHAHFVTSTTHKTLRGPRGGLIL
AKAEFEKSINSNVFPTLQGGPLMHVIAGKAVAFKEAATPEFKTYQEQVLKNAQAMAATLI
ERGLRVISGRSESHMFLVDLRSKGLTGKVADAVLGQAHITVNKNAIPNDPESPFVTSGIR
IGSPAITTRGFKEAEAVIVANLIADVLDNPADEANIAAVAVKVKELTARFPVYGA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaagtccgccactatcgcccaatacgatcctgatttagccgctgccattgca
ggtgaagttgttcgccagcacgagcatatcgagctgatcgcgtcagaaaattacaccagc
ccagcggtgatggaagctcaaggctcgcaactgactaataaatacgccgaaggttatccg
ggtaagcgtttttatggtggttgtgaatttgttgatacggttgagcagttggccattgat
cgcgtaaaagcattgtttggtgcagagtacgccaatgtgcagccacattccggctcgcaa
gccaaccaggccgtgtatttctccatcctgaagccgggcgataccgtaatgggtatgaac
ctaggccacggtggtcacctgacacacggctcgccagcaaatttatccggtaagctcttt
aatatcgtggcttacggcctgaacgaaaatgaagaaatcgattatgacgatatggaacgt
gtagcgcttgaaaccaagcctaagctcttgatcggtggcgcttctgcctacgcgctgcgc
tttgattgggcgcgtatgcgtgaaatcgccgacaaagttggcgcttactttatggtcgac
atggcgcattacgctggtctgatcgcggcaggcgtttatccaaacccagtgccacacgct
cactttgtgacatcgactacgcataaaacattgcgcggcccgcgtggtggtttgattttg
gctaaagctgaattcgaaaaatcgatcaattcaaatgtgttcccaacgctgcaaggcggc
cctttgatgcatgtgatcgccggtaaagcggtggcatttaaagaagcggcaacaccagag
ttcaaaacataccaagagcaagtactgaaaaacgcacaagccatggctgcaaccttgatc
gagcgtggcctgcgtgtgatttctggtcgttctgaatcgcatatgttcttagttgatctg
cgctctaaaggcctgactggcaaagtggctgatgctgtactgggccaagcgcatatcacc
gtcaataaaaatgccattccaaacgatcctgaaagcccgtttgtgacttctggtatccgt
atcggctccccagccatcacgacccgtggtttcaaagaagcagaagccgtgatcgtggct
aacttgattgcagacgtgctggacaatccagcggatgaagcaaacattgcagccgttgca
gtaaaagtaaaagaattgacagcgcgcttcccagtttacggcgcttaa
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