Janthinobacterium sp. LM6: BZG29_19900
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Entry
BZG29_19900 CDS
T04756
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jal03019
]
BZG29_19900
03009 Ribosome biogenesis [BR:
jal03009
]
BZG29_19900
03036 Chromosome and associated proteins [BR:
jal03036
]
BZG29_19900
Enzymes [BR:
jal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BZG29_19900
Messenger RNA biogenesis [BR:
jal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BZG29_19900
Ribosome biogenesis [BR:
jal03009
]
Eukaryotic type
90S particles
RNase
BZG29_19900
Prokaryotic type
rRNA processing factors
BZG29_19900
Chromosome and associated proteins [BR:
jal03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BZG29_19900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AQR70319
LinkDB
All DBs
Position
complement(4551855..4552670)
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AA seq
271 aa
AA seq
DB search
MNLQLLQTRLGYTFQDAGLLQQALTHRSHSSLHNERLEFLGDSILNCVVASILYERFKSI
DEGDLSRLRANLVKQQSLYEIAQKLELSQFLRLGEGELKSGGFRRPSILADTLEALLGAI
FLDTGFDAASTVIRAFYIPILDSVDPQTLGKDAKTLLQEFLQSKKISLPQYNVVATHGAA
HSQEFEIECLVPKLNIQVYGRGGSRRAGEQAAAKLALDVAEQALLKSPAASRKPKPRAAQ
LKLAGIATIQSDDAAAPAAPAIAAHTKQNRH
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcagttattgcaaacccgtttaggctatacgttccaggatgctggcctgttg
cagcaagccttgacgcatcgtagccacagcagtttgcataacgagcggctggaattcctc
ggcgactccatcctcaactgcgtggtcgcttccatcctgtacgaacgcttcaagtccatc
gacgagggcgacctgtcgcgcctgcgcgcgaatctggtgaagcagcagtcgctgtatgaa
atcgcgcaaaagctggaactgtcgcaattcctgcgcctgggcgaaggcgagctgaaatcg
ggcggtttccgccgtccgtccatcctcgccgataccctggaagccttgctgggcgcgatt
ttcctcgacacgggcttcgacgccgccagcacggtgatccgcgccttctacatccccatc
ctcgactcggtcgatccgcaaaccctgggcaaggatgccaagaccctgctgcaggagttt
ttgcaaagcaagaaaatttcgctgccacagtacaacgtggtggccacccatggcgccgcc
cacagccaggaattcgagatcgaatgcctggtgccgaaattgaacatccaggtctacggc
cgtggcggaagccgccgtgccggtgagcaagccgccgccaaactggcgctcgacgtggcc
gagcaggcgctgttgaagtcgcctgcagccagccgcaagccgaaaccgcgcgccgcccag
ctcaagctggccggcattgccaccatccagagcgacgacgcggcagcccctgctgccccg
gcgatcgccgctcacactaaacagaatcgacactag
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