Janibacter indicus: ASJ30_07825
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Entry
ASJ30_07825 CDS
T04569
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:3.6.4.-]
Organism
jte
Janibacter indicus
Brite
KEGG Orthology (KO) [BR:
jte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jte03019
]
ASJ30_07825
Messenger RNA biogenesis [BR:
jte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ASJ30_07825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
T4SS-DNA_transf
AAA_22
Pox_A_type_inc
MTR4_beta-barrel
AAA_30
Motif
Other DBs
NCBI-ProteinID:
APH01455
UniProt:
A0A1L3MGD0
LinkDB
All DBs
Position
complement(1648751..1651555)
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AA seq
934 aa
AA seq
DB search
MSSPAERFAAARRRRASELTPFVEGLGFELDTFQREACEAVEGGHGVLVAAPTGAGKTVV
GEFAVHLALARGQKAFYTTPIKALSNQKYHELAARHGYDRVGLLTGDVSVNGEAPVVVMT
TEVLRNMIYAGSSTLDTLAFVVMDEVHYLADRFRGAVWEEVIIHLPRSVQVVSLSATVSN
AEEFGAWLAEVRGGTEIIVSEERPVPLWQHMQVGRDVYDLFVDDGSAGTPAKVNPELLDA
IRARVRGGSEDDQRGRGGHRGGRDRRGGRGRRNDRGRGGQGPRGGGGGRFGGAASRTEVI
RELDRDGLLPAITFIFSRAGCEGAVGQLLGNDVRLVSEREGELNRRTVEERAAVLEGEDL
DVLGYHQFVEGISRGFAAHHAGMLPLFREIVEELFTAGRIRAVFATETLALGINMPARTV
VLEKLVKFNGESHVEITPAEYTQLTGRAGRRGIDVEGHALVVWSRGLDPMSVAGLASTRT
YPLRSSFRPTYNMAVNLVAQVGRQTAKEVLETSFAQFQADRAVVGLATKVREQQESLEAY
SEAMHCHMGDFREYAALRRRISDLEKEGSRKRNANCRAEIAVSLEALSVGDIVRIGGRRS
GIAIVVAPPRSYKGELTAPTVLTEHQQIRRLTAADLDGPVTPLGRLAVPKGFNPKSAKQR
SDLAATLRIKAPHEDAPSVRARAVESAKGEDERLEQLRRELKSHPCHQCPEREEHARWAA
RWWKLKRETSALQRKVEHRTNSVAQTFERICVVLTRMGYLGDDGESVTDLGTRLRRLYTE
KDLLAAECLRGGAWKRLDPAELAAVVSMLVHEARRDEHDPFPRMPTDNVSDAWQDMVRRW
SELEDLEQANALPATGEPDGGLAWAVHRWASGRRLDEVLSGSDLTAGDFVRRCKQVVDLL
DQVADAAPEPHLRGVARTAVDKVMRGVVAADRLD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgcccgccgaacgctttgccgccgcccgccgtcgccgagccagtgagctcacc
cccttcgtcgagggcctgggctttgagctcgacaccttccagcgggaggcctgcgaggcg
gtcgaagggggacacggcgtgctcgtcgctgccccgaccggcgcgggcaagacggtcgtc
ggcgagttcgccgtgcacctggccctcgcgcgggggcagaaggccttctacacgacgccg
atcaaggccctgagcaaccagaagtaccacgagctcgccgcccgccacggctacgatcgc
gtcggcctgctcaccggtgacgtctcggtcaacggcgaggccccggtcgtcgtcatgacg
accgaggtcctgcgcaacatgatctacgccggctcctcgaccctcgacacgctggccttc
gtcgtcatggacgaggtgcactacctcgccgaccgcttccgcggcgccgtgtgggaggag
gtcatcatccacctgccccgctcggtccaggtcgtctccctctcggcgacggtgagcaac
gccgaggagttcggcgcctggctcgccgaggtgcgcggcggcaccgagatcatcgtctcc
gaggagcgcccggtcccgctgtggcagcacatgcaggtcggccgcgacgtctacgacctc
ttcgtcgacgacggctccgccgggaccccggcgaaggtcaaccccgagctgctcgatgcc
atccgcgcccgcgtgcgaggtggcagcgaggacgaccagcgtggccgcggtggccaccgg
ggtggtcgtgaccgtcgcggcggacgcgggcgtcgcaacgaccggggccgcggcggccag
gggccgcgcggtgggggaggtggccgcttcggcggggccgcctcgcgcaccgaggtcatc
cgggagctcgatcgcgacgggctgctgccggcgatcaccttcatcttcagccgcgccggg
tgcgagggcgcagtcggtcaactcttgggcaatgacgtgcgtctggtgagcgagcgcgag
ggcgagctcaaccgacgcacggtcgaggagcgggctgccgtcctcgagggtgaggacctc
gacgtcctcgggtaccaccagttcgtcgagggcatctcccgcggcttcgccgcccaccac
gccggcatgctcccgctcttccgcgagatcgtcgaggagctgttcacggcagggcgcatc
cgggcggtcttcgcgacggagacgctcgccctggggatcaacatgcccgcgcgcacggtg
gtcctggagaagctggtgaagttcaacggcgagtcgcacgtcgagatcaccccggccgag
tacacgcagctcaccggacgcgctggccgacgcggcatcgacgtcgagggtcacgccctc
gtcgtgtggtcacgcgggctggacccgatgtcggtggccggtctcgcatcgacccgcacc
tacccccttcgctccagcttccggccgacctacaacatggccgtcaacctcgtggcccag
gtgggccgccagacggccaaggaggtgctcgagacctccttcgcgcagttccaggccgac
cgcgccgtcgtcgggctggcgaccaaggtgcgcgagcagcaggagtcgctcgaggcctac
agcgaggccatgcactgccacatgggcgacttccgcgagtacgccgcgctgcggcggcgc
atctccgacctcgagaaggagggctcgcgcaagcgcaatgccaactgtcgcgccgagatc
gccgtctcgctcgaggccctgtccgtcggagacatcgtccgcatcgggggccgccggtcg
ggcatcgcgatcgtcgtcgccccgccacgctcctacaagggcgagctgacggcaccgacc
gtgctcaccgagcaccagcagatccgccggctgaccgccgccgacctcgacggtccggtc
acccccctcgggcggctggccgtccccaaggggttcaacccgaagtcggcgaagcagcgc
tccgacctcgccgccacgttgcggatcaaggcgccccacgaggatgccccgagcgtgcgg
gcgcgcgccgtcgagagcgcgaagggggaggacgagcgcctcgagcagctgcgccgcgag
ctgaagtcgcacccctgccaccagtgcccggagcgcgaggagcacgcccgctgggcggcg
cgctggtggaagctcaagcgggagacctccgccctgcagcgcaaggtcgagcaccggacc
aactccgtggcgcagaccttcgagcggatctgcgtcgtgctgacccgcatgggctacctc
ggcgacgacggcgagagcgtcaccgacctcggcacccgtctgcgccggctctacacggag
aaggacctgctcgcggccgagtgcctgcgcgggggagcgtggaagcgcctcgaccccgcc
gagctggcggccgtcgtctcgatgctcgtccacgaggcccggcgcgacgagcacgacccc
ttcccgaggatgccgaccgacaacgtctccgacgcgtggcaggacatggtccgccgctgg
agcgagctcgaggacctcgagcaggccaatgccctgcccgcgaccggcgaacccgacggg
ggactggcctgggcggtccaccggtgggccagcgggcgccggctcgacgaggtgctgtcg
gggtcggacctcaccgcaggtgacttcgtgcggcggtgcaagcaggtcgtcgacctgctc
gaccaggtggccgacgccgcgcccgagccgcacctgcgcggcgtggcccgcacggcggtc
gacaaggtgatgcggggagtcgtcgccgccgaccggctggactga
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