KEGG   Kitasatospora albolonga: B7C62_25660Help
Entry
B7C62_25660       CDS       T05009                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
kab  Kitasatospora albolonga
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kab00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    B7C62_25660
Enzymes [BR:kab01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     B7C62_25660
DNA repair and recombination proteins [BR:kab03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     B7C62_25660
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5753466..5754419)
Genome map
AA seq 317 aa AA seqDB search
MTPITEVEGRRLSLSNLDKVLYPATGTTKGEVLHYYAATVAGAILPHLRDRPVSFLRYPD
GPRGQLFVTKNPPPGTPDWVRTAPVPHSEDPAARQVVVDDLAALMWAANLVVEFHTPQWR
AGAPGTADRMVFDLDPGAPATVVECCAVARWLRERLASDGLSAYGKTSGSKGLHLLVPLE
PTPSAEVSAYAKRLAVEAESALPDLALHRMKRALRPGKVFVDFSQNSASKTTATPYTLRA
RAEPTVSAPLTWEEIAECRSPEALVFRADDMAGRLERYGDLLGPLLDPDRARPLPTDRPD
RPRPPTDRPDRSRPPAD
NT seq 954 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgatcacggaggtggaggggcggcgcctctcgctcagcaacctcgacaaggtg
ctgtatccggccaccgggaccaccaagggcgaggtgctgcactactacgcggccacggtg
gcgggcgcgatcctgccccatctgcgcgaccgcccggtctccttcctgcgctatccggac
gggccccgggggcagctcttcgtcaccaagaacccgccgcccggtacgcccgactgggtg
cgcaccgcccccgtgccgcacagcgaggacccggccgcccgccaggtggtggtcgatgat
ctggccgcgctgatgtgggcggccaacctggtggtggagttccacaccccgcagtggcgc
gcgggggccccggggaccgccgaccggatggtgttcgacctggaccccggcgcccccgcc
accgtcgtggagtgctgcgcggtggcccgctggctgcgggagcggctcgcctccgacggt
ctgtccgcgtacgggaagacgtccggctccaaggggctgcatctgctcgtcccgctggag
ccgacgccgtccgccgaggtgtccgcgtacgcgaagcgcctcgcggtggaggcggagagc
gccctgccggacctggccctgcaccggatgaagcgcgccctgcggccgggcaaggtcttc
gtcgacttcagccagaactccgcgtcgaagaccaccgccaccccctacaccctgcgggcc
cgggccgagcccaccgtctccgcgccgctcacctgggaggagatcgcggagtgccggtcc
ccggaggcgctggtgttccgcgcggacgacatggccgggcggctggagcggtacggggac
ctgctcggccccctgctcgacccggaccgggcccggccgctgcccacggaccgaccggac
cggccccggcctcccacggaccgaccggaccggtcccggcctcccgcggactga

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