Kozakia baliensis: A0U89_15105
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Entry
A0U89_15105 CDS
T04547
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kba
Kozakia baliensis
Pathway
kba03420
Nucleotide excision repair
kba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0U89_15105
03430 Mismatch repair
A0U89_15105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kba03400
]
A0U89_15105
Enzymes [BR:
kba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0U89_15105
DNA repair and recombination proteins [BR:
kba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0U89_15105
MMR (mismatch excision repair)
Other MMR factors
A0U89_15105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AOX18638
UniProt:
A0A1D8UY56
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All DBs
Position
pKB14400_2:complement(15447..17504)
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AA seq
685 aa
AA seq
DB search
MSDLDIPHQLAPILDALTPEQRAAALALGRVLVLAGAGTGKTKTLTAGVATRIALYGMVP
ARILCVTFTNKAAAEMRNRIVQACGDGMAPSWLGTFHALCARQLRAEPDVAHLRPGFDIR
DADDTLTMVRRLIKAVPKEQLPVPMEGAAGDAKQIAKMAERIARLKEDLVTPDAAPAHVQ
GMIARAHEKNNFIDREGWQFAAVLYRQYQALLREQNAADFGDLLMWPTLALVHDTIYRDR
WSRRFTAVLADEYQDVNRAQFLWLKMMSEASGELFAVGDDNQSIYSWRGAKVKFIRGFAQ
EFPGAKMYRLEQNFRSTGHILDASNAVISHDPARIPKTLFTRKGAGMRIETLGFAYGSEE
AEAIAREIGRRAAHGAAWHDIAVIYRQNRLSRAIEEAFIKARVPFEIVGDVGFWQRAAVK
DALALLSLSASPEDRQSDEAFRRVANKPARGLGAKSLGEIEIAAQREGTSLLGAVPHTKL
SPKCGAALSRFVQTIRASGRREPESVGERLSWLLEATGYLPALRADDSDEAANQRENLAE
LISLAHDFAEIGQIMEHAALASGAPGEKGKERVQLLTMHRAKGLEFRHVFLPAWEEGIFP
GNNARNHDEERRLAYVALTRAMEQATISWCDYRQGATTTPSRFVDEIPLENRINRWNWME
PQSAARQTSAAWAQTQRELSALGLA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctcgatattccgcaccagcttgcgccgatcctcgacgcgctcaccccggag
cagcgtgcggccgccctggcgctcggccgggtgctcgtgctcgccggagccgggacgggc
aagaccaagaccctgacggcgggtgtcgccacgcggatcgcgctctacggcatggtcccc
gcgcgcatcctgtgcgtgaccttcaccaataaggcggccgccgagatgcgcaaccgcatc
gtgcaggcctgcggagatggcatggcgccgtcctggctcggcacgtttcacgccttgtgc
gcgcgccagttgcgggccgaacccgatgtcgcccatctgcggcccggtttcgacatccgc
gacgccgatgacacgcttaccatggtgcgccggctgatcaaggcagtcccgaaggagcag
cttccggtgccgatggaaggggcggcgggcgacgccaagcagattgccaagatggccgag
cggatcgcgcgcctgaaggaggatttggtgacgcccgacgctgcccccgcgcatgtgcaa
gggatgatcgcacgcgctcacgagaagaacaatttcatcgatcgggagggctggcagttc
gcggccgtcttatatcgccaatatcaggcgttgctgcgcgaacagaacgcggccgatttc
ggcgacctgctgatgtggccgacgctcgccctggtgcacgatacgatctaccgtgatcgt
tggtcgcgtcgctttacggcggtgctcgccgacgagtatcaggacgtcaaccgcgcccag
tttctctggctgaaaatgatgtcggaagcctcaggcgaactcttcgcggtcggcgatgac
aatcagtcgatctattcctggcgcggggcaaaagtgaagtttatcagagggttcgcgcaa
gaatttcctggcgcgaaaatgtatcgcctcgagcagaatttccgctcgaccggtcatatc
ctcgacgcgtccaatgcggtgatctcccacgacccggcgcgcatcccgaaaaccctcttt
acccgcaagggcgcggggatgcggatcgagacacttgggtttgcctatggcagcgaggaa
gcagaagcgatcgcgcgcgaaatcggccgccgggcagcccatggcgcagcctggcacgat
atcgccgtgatctaccgccagaaccgtctgagccgcgcgatcgaggaggcgttcattaag
gcccgcgttccgttcgagattgtgggcgacgtcgggttctggcaacgcgcggcggtcaaa
gacgccctggcgctgttgtctctttccgccagcccggaggaccggcagtccgacgaggcg
ttccggcgcgtggccaacaaaccggcgcgcgggctcggagccaagagtctgggcgaaatc
gagatcgccgcgcaacgggagggcacgtcgctcctgggcgcggtgccgcacacgaagctt
tcaccgaagtgcggcgcggcgctgtcgcgcttcgtgcagacgatccgtgcctccggtcgc
cgggaaccggagagcgtcggtgagcggctaagctggctgctcgaagcaacgggttatctt
cccgcgttgcgggcggacgacagcgatgaggcggccaaccagcgggaaaacctcgccgaa
ctgatctcgcttgcccacgattttgccgagatcggccagatcatggaacatgccgcgctc
gcgtccggggcgcccggagaaaaaggcaaggagcgtgtccagttgctgaccatgcaccgc
gccaaagggctcgagttccggcacgtgtttctgcccgcatgggaggaaggcattttccca
ggaaacaacgctcgcaaccacgacgaggagcggcggctggcgtatgtcgcgctgacccgc
gccatggagcaggcgaccatcagctggtgcgactatcgccagggcgccacgacgacgccg
tcgcgcttcgtggacgagatcccgctggagaaccggatcaaccgctggaactggatggag
ccgcagagcgccgcccggcagaccagcgcggcatgggcgcagacgcaacgtgaactatcg
gcgttgggtctggcatga
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