Candidatus Korarchaeum cryptofilum: Kcr_1478
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Entry
Kcr_1478 CDS
T00668
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
kcr
Candidatus Korarchaeum cryptofilum
Brite
KEGG Orthology (KO) [BR:
kcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kcr03016
]
Kcr_1478
Enzymes [BR:
kcr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Kcr_1478
Transfer RNA biogenesis [BR:
kcr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Kcr_1478
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
tRNA_int_end_N2
SpoIIE
Motif
Other DBs
NCBI-ProteinID:
ACB08224
UniProt:
B1L6Z5
LinkDB
All DBs
Position
complement(1459298..1460374)
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AA seq
358 aa
AA seq
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MAKVRGILRDGFVYVEADFDKLYRQGYGEIVDGSLEMHPLEASYLVWEQKMEVFDENGKN
ISFEDLLTIMINDPATFLKYVVYSDLRRRSRLVVYERATEFLRLYPKGASIGERASKQLI
LPLSEDQPISHDQILASLEKVMRLRKELILAVVDDEMNVTYYEIEKFSPKPRESNLKDIP
EKSGVLIGDRVLIFEDPSGLYSRGFWGHPIGIEKPEPFKDYEQPLQLPLIEALYLVSRGK
LKVRDPKGNIIGLEELRNIFSGVRDNAEVKERVFSYWRDLGYIPKAGSKYGVDYMIYERG
PGLEHAPYLCIASDVRGKIKPIDLIRAGRLATSVRKELVVSLVSGEDILSYKLRWFKP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagttcgaggcatcttaagggacgggttcgtctacgttgaggcggatttcgat
aagttatacaggcagggctacggggagatcgtcgatggctccctagagatgcatccccta
gaagcttcctacttagtttgggagcagaagatggaggtttttgatgaaaatggaaaaaac
attagcttcgaagacctattaactataatgataaatgatcccgctaccttcctcaagtac
gtggtctatagcgatctcaggaggaggagcaggctagttgtttacgagagggctacggaa
ttcctcaggctctatccgaagggggcatcgataggggagagagcttctaagcaattgatc
cttcccctctctgaggatcaacccatatcccatgatcagatattggcctccctcgagaag
gtcatgaggctcaggaaggagctaatattagcagtagtggatgatgagatgaacgtcaca
tattatgagatagagaagttctctcctaagccaagggagagcaacctgaaggatataccc
gagaaatccggggtccttataggcgatagagtactaatatttgaggatccatccgggctc
tactctaggggcttctggggacatccaatagggatcgagaaaccggagccgttcaaggat
tacgaacaacctctccagttacccctgatagaggccctctacctagtctcgagggggaag
ctgaaggtcagggatcctaaggggaatattatagggttagaagagctgaggaatatcttc
tctggggttagggataatgccgaggtgaaggagagagtgttctcctactggagggatcta
gggtacatcccgaaggcgggctcgaagtacggggtcgattacatgatatacgagagggga
ccgggcctcgaacacgcaccttacctctgtatcgcgagcgatgtaaggggaaagataaag
cccatagatctgataagggccggtagactcgctacttcggtcaggaaggagcttgtagta
tctctagtctctggagaggatatattgagctacaagttaagatggttcaagccatga
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