Dokdonia sp. 4H-3-7-5: Krodi_0051
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Entry
Krodi_0051 CDS
T01484
Name
(GenBank) ABC transporter related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Krodi_0051
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kdi02000
]
Krodi_0051
Enzymes [BR:
kdi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Krodi_0051
Transporters [BR:
kdi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Krodi_0051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
RsgA_GTPase
AAA
nSTAND3
AAA_22
AAA_29
G-alpha
AAA_16
DEAD
AAA_24
APS_kinase
MMR_HSR1
DUF2262
Mg_chelatase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEE18042
UniProt:
F4AXC5
LinkDB
All DBs
Position
54630..56465
Genome browser
AA seq
611 aa
AA seq
DB search
MEYFKKILKFAIPYKKYGFLNILFNILYALFGTLAFVSLIPMLTVLLKQVDPVRIKPTLE
SSSSFKSFLDDSLNYFINTQTDLHGDVYVLGIMVGLVIATFLLKNVFGYLANYFITYLRN
GVLKDIRNKMYNRIVNLNLSFYSEKRKGDTIARITSDVLEVQHSFLSILELFIREPLTIL
FAIGTMLFMSAQLTLFVFIFIPVAGFIISKIGKSLKKKSGQVQTEQGYFLSLVEETLANL
KIIKGFAAEDRMETKFQTSTTNFEKYSNTLTHRQNLASPVSEFLGITVIGILLWYGGNMV
LDGSGGLDGAQFIVYMGLAYQILTPAKSIAKASYSVKKGDAAAARILEVLETETTIKDNP
RAISKDTFDSRINLEGISFKYDEESVLKNFTLNVKKGHTVALVGQSGSGKSTIANLVTRF
YDVNEGNIKIDNTDIKDISKKSLRNLMGLVTQDAILFNDTIRNNINLGKENATDQEIIDA
LKIANAWEFVQDLPKGLDTNIGDSGNKLSGGQKQRLSIARAVLKNPPIMILDEATSALDT
ESERLVQKALENMMKNRTSIVIAHRLSTIQNADEIVVMQKGEIVEQGKHQELIDKKGMYH
KLVSMQSFEEA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaatattttaagaagattctcaagtttgccattccttataagaaatacggattttta
aatattttgtttaatattttatatgctctttttggtacgctagctttcgtttcgcttata
cctatgcttacagtgctacttaaacaagtagaccctgtgagaataaaacctactcttgaa
tcttccagcagttttaaaagctttttagatgactctcttaactattttatcaatacgcaa
actgatctgcatggtgacgtgtatgtattaggtataatggttggacttgtaattgcaacc
tttttattaaaaaatgtctttggatacttagcaaactacttcatcacctatctaaggaat
ggagttcttaaagacatccgtaataagatgtacaaccgtatcgtcaatcttaatttaagt
ttctactcagaaaaaaggaaaggagatactattgcaagaatcacgtctgatgttcttgaa
gtgcaacattctttcttatcaatactagagctttttataagagaacctcttactattctt
tttgctataggtactatgttgtttatgagtgcacaactgactctttttgtatttattttc
atacctgtggctggatttataatttctaaaattggaaaaagcctcaaaaagaaatcaggt
caagtacagacagaacagggatatttcttgtctctagtagaagaaacactagccaatctt
aaaattataaaaggatttgcagccgaagatagaatggaaactaagtttcaaacctctact
actaattttgaaaaatacagcaatactcttacacataggcaaaacttagcatctcccgta
agtgagtttttgggaattacagtaatcggaatcttattatggtacggcggcaatatggtg
ttagatggttctggaggactagatggagctcagttcattgtttatatgggattagcatat
caaattttaacccctgcaaaatctattgcaaaggctagttactcggttaaaaagggagac
gctgctgccgctcgtattctagaagtattagaaactgaaacaactataaaagacaaccct
agagcgattagtaaagatacatttgacagtcgtataaatttagagggcatctctttcaag
tatgatgaggaaagtgtactaaagaactttacacttaatgtaaagaaaggacatactgta
gcacttgtaggtcaatctggttctggaaaaagtacaattgcaaatctagttactcgtttt
tatgacgttaatgaaggaaacataaaaatagacaatacagatataaaagatatttctaaa
aaatctctacgtaacctcatggggttagtcactcaagacgctattctctttaatgacact
atacgcaacaatataaatctaggtaaagagaacgccacagatcaagaaatcatcgatgca
ttaaaaattgccaacgcttgggagtttgtacaagacctccctaagggacttgatactaat
ataggtgatagtggtaataaattgagtggaggacaaaagcagcgtctctcaatagctaga
gcggttcttaagaatcctcctatcatgattttagatgaagctacctcagcactagacacg
gagagtgagcgtctcgtgcagaaagcgctagaaaatatgatgaagaacagaacttctatt
gtaattgctcacagactttctactattcaaaatgcagacgaaattgtggtcatgcaaaaa
ggagaaattgtagagcaaggaaaacatcaagagcttattgataagaagggaatgtatcac
aaactagtctcgatgcaatcttttgaagaagcttag
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