Dokdonia sp. 4H-3-7-5: Krodi_1027
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Entry
Krodi_1027 CDS
T01484
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00350
Tyrosine metabolism
kdi00360
Phenylalanine metabolism
kdi00380
Tryptophan metabolism
kdi01100
Metabolic pathways
kdi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Krodi_1027
00360 Phenylalanine metabolism
Krodi_1027
00380 Tryptophan metabolism
Krodi_1027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kdi04147
]
Krodi_1027
Enzymes [BR:
kdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Krodi_1027
4.1.1.105 L-tryptophan decarboxylase
Krodi_1027
Exosome [BR:
kdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Krodi_1027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AEE19011
UniProt:
F4AZ56
LinkDB
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Position
complement(1170344..1171771)
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AA seq
475 aa
AA seq
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MDKDKLELSKEEMTAYGYRIVDAVVEHFDTQNSKFPLASGTREEMDSLFLEEAPEKASDP
QEVLEFVIEKVMKQSAISTHPKSFSFVPGPSNYVSAMSDTLATGFNIFSGGWSQSPPAAE
LEIVTISWLLKIFGFPVKKGGGIFTSGGSMANLTAIVTARRVMCGEDFANAVIYLSDQAH
SSNIKALRIVGFTKDQIRLIPTDSEFKFSTIKLRSVIARDRLEGYNPFCVIATAGTTNTG
TVDPLTEISKICKEEKLWFHIDGAYGGAAILAKNGKELLKGISKADSLTVDPHKWFFQPY
EMGCLLIRNHKYLKSTFVEKPEYLRDIEGNESEINFYDHGVQLTRRFRALKFYMSLKTFG
LEGFRNAITYNIKIAEKTEKLLRKSKKWEIVSPATLAIINFRYNPIGNKFTEKQLDELNQ
KISGMVTASREAQLVTTILNKQVVLRMCLINPRTTFDDVQDTLRLCEKFADEILG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggataaagacaaattagaactgtcaaaagaagaaatgacagcttacggataccgtatt
gtagatgctgtagtagaacattttgacacacaaaacagtaagtttcctttggcttcggga
actcgagaagaaatggactctttgtttctagaagaagcaccagaaaaagcctcagatccg
caagaagtacttgaatttgtgatagaaaaagtgatgaaacaaagtgcgatttctacgcat
cctaagtcgttttcatttgttcctggacctagtaactatgtaagtgctatgtctgacacg
ctagctacaggatttaatatattttctggcggctggtcacaatcaccacctgcagcagag
ctagagattgtaaccataagttggttacttaagatttttggctttccagtaaaaaaaggt
ggagggatttttacaagtggaggatctatggcaaaccttactgctattgttaccgctcgt
cgtgtaatgtgtggggaagattttgcaaatgcagttatctacctttcagatcaagcacac
tcgtcaaacataaaggcgttgcgcattgtaggttttacaaaagatcaaatacgattaata
ccaacagactctgagtttaaattttctactataaaacttcgtagtgttatcgctcgtgat
agactggaaggttataatccgttttgtgtaattgctaccgcaggaactacaaatacggga
acagtagatcctcttacagaaatttcaaaaatttgtaaagaagagaaactgtggttccat
atagatggagcatatggaggagcggcgattcttgcaaaaaacggaaaggaacttttaaaa
ggaatttctaaagcagattctcttactgtagatccgcacaagtggtttttccaaccttat
gagatgggttgcttgttaatacgcaaccacaaatacctgaaaagtacttttgttgagaag
ccagagtacttaagagatatagaaggtaatgaatctgagattaatttttatgatcacggt
gtccaactaacaagacgttttagagcacttaaattctatatgtctttaaaaacatttgga
ctagaaggatttagaaacgccatcacctataacatcaaaatagccgaaaagaccgagaag
ctactacgtaaaagcaaaaagtgggagattgtatcgccagctacgctcgcgatcattaac
tttaggtataaccctattggaaataaatttacagagaagcaactagatgaactcaatcag
aaaatttctggtatggtgacagcatcccgtgaggctcaactagtaactacgatactcaat
aagcaagtggtgctgcgaatgtgtttaataaacccacgtactacttttgatgatgtacaa
gatacgcttagactttgtgaaaaatttgcagacgaaatcttaggataa
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