KEGG   Klebsiella oxytoca KONIH1: KONIH1_21060
Entry
KONIH1_21060      CDS       T03269                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kok  Klebsiella oxytoca KONIH1
Pathway
kok03030  DNA replication
kok03410  Base excision repair
kok03420  Nucleotide excision repair
kok03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KONIH1_21060 (ligA)
   03410 Base excision repair
    KONIH1_21060 (ligA)
   03420 Nucleotide excision repair
    KONIH1_21060 (ligA)
   03430 Mismatch repair
    KONIH1_21060 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kok03032]
    KONIH1_21060 (ligA)
   03400 DNA repair and recombination proteins [BR:kok03400]
    KONIH1_21060 (ligA)
Enzymes [BR:kok01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     KONIH1_21060 (ligA)
DNA replication proteins [BR:kok03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KONIH1_21060 (ligA)
DNA repair and recombination proteins [BR:kok03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     KONIH1_21060 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KONIH1_21060 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     KONIH1_21060 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      KONIH1_21060 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD PTCB-BRCT HHH Prok-E2_C DZR_2
Other DBs
NCBI-ProteinID: AID91476
LinkDB
Position
complement(4422463..4424487)
AA seq 674 aa
MESNEQKLTELRTTLRHHEYLYHVMDTPEIPDAEYDRLMRELRELEAQHPELITPDSPTQ
RVGAAPLASFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKNTDNLTYCCELKLDGLA
VSILYENGLLVQAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPQRLEVRGEVFLPQAG
FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPASHS
ARLQQFKSWGLPVSERVKLCHTPEEVLTYYRQVEEDRPKLGFDIDGVVIKVDSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN
ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETREIVFPTHCPVCHSDVERVEG
EVVTRCTGGLICGAQRKEALKHFVSRRALDVDGMGDKIIDQLVEKEYVHTPADLFQLTPG
KLTGLDRMGPKSAQNVVDALEKSKETTFARFLYALGIREVGEATAAGLAAHFGTIEALEQ
ASIDDLQKVPDVGIVVATHVRNFFAEESNREVIAQLRKEGVRWPAPVVVNAEEIDSPFAG
KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIAVI
DEDEMLRLLGESRG
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggaatcgaacgaacaaaaactgactgaactgcgaaccacgcttcgccatcatgaatat
ctctaccacgtcatggatacgccggaaatccctgatgcggaatacgatcggttaatgcgc
gaactgcgagagctggaagctcagcaccctgagctgatcaccccggactcgcccacccag
cgcgtcggtgccgcaccgttagcctcttttagccagattcgccatgaagtcccgatgctg
tcgctggacaacgtttttgatgaggagagcttcctcgcgttcaacaagcgggtacaggat
cgcctgaaaaataccgataacctgacttactgctgcgagctcaagctggatggcctggcg
gtcagtatcctgtatgaaaacggcctgctggtgcaggcggcgacccgcggcgatggaacg
accggtgaagatattacctccaacgtgcgtaccattcgcgcgattcccctgaagctacgc
ggtgacaatattccgcagcggcttgaggtgcgcggagaggtgttcctgccgcaggcaggg
tttgaaaaaattaatgaagaggcgcggcgaaccggaggtaaagtctttgctaacccgcgt
aacgcggcggcggggtctttacgccagctcgatccgcgaattaccgcgaagcgtccgctc
actttcttttgctacggcgtgggcgtgctggaaggcggcgagctgcctgccagccactcg
gcgcgcttgcagcagtttaagtcctgggggctgccggtcagcgagcgtgtaaagctctgc
catacgccagaggaagtgcttacttactatcgccaggttgaagaggatcggccgaagctg
gggtttgatatcgacggcgtggtcatcaaggtcgattcgctggcgctgcaggaacagctt
ggcttcgtagcccgcgcgccgcgctgggcggtggcgtttaagtttccggcgcaggagcag
atgactttcgtgcgcgacgttgagtttcaggtcgggcgcactggcgccatcacgccggtt
gcgcgtctggagccggtacacgtcgccggggtcctggtcagcaacgcgacgctgcataat
gctgatgaaatcgagcgtctggggctgcgtatcggcgataaggtggtcattcgccgcgcc
ggcgatgttatccctcaggtcgtgaacgtcgtgctctcagaacgcccggaggagacgcgt
gagatcgtgttccccacccattgtccggtatgtcattccgacgttgaacgcgtggaaggc
gaagtggtgactcgctgtaccggcggtctgatctgcggcgcccagcgtaaagaagcgctc
aagcattttgtctcccgtcgcgccctggacgttgacggtatgggcgataaaatcatcgat
cagctggttgaaaaagagtacgtgcatacgccggccgatctcttccaactgacgccgggt
aaactcaccgggctcgatcgcatggggcccaaatcagcgcagaacgtggtggatgccctg
gagaagtccaaagagaccacctttgcccgtttcctttatgcgctggggatccgcgaagtc
ggtgaggcgacggcagccggtttagcggcccattttggcaccattgaggcgctggagcag
gcttcaattgacgatctgcaaaaagtgcccgatgtcgggattgtggttgccacgcacgtg
cgtaatttctttgccgaagagagcaaccgcgaagtgattgctcagctgcgtaaagaaggc
gtccgctggccggcgccggtggtggtcaatgcggaagagattgatagcccctttgccggc
aaaacggtggttctgaccggtagcctgagtcagctctcccgtgacgatgcgaaagcccgg
ctggttgcgctgggggcgaaggtggcgggcagcgtgtcgaagaagaccgacctggtcatc
gccggggaggcggcgggctctaagcttgccaaagcgcaggagctgggaattgcggtgatc
gatgaagacgaaatgctgcgtctgctcggagagtcgcgtggataa

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