KEGG   Kibdelosporangium phytohabitans: AOZ06_15230Help
Entry
AOZ06_15230       CDS       T04088                                 

Definition
(GenBank) DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
kphy  Kibdelosporangium phytohabitans
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kphy00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AOZ06_15230
Enzymes [BR:kphy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AOZ06_15230
DNA repair and recombination proteins [BR:kphy03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AOZ06_15230
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3277150..3278583
Genome map
AA seq 477 aa AA seqDB search
MSGDLTEYRKKRDAARTPEPVPHEAVLPHGDDDTFVIQEHHARQLHWDVRLERGGVLVSW
AVPKGLPTDPKTVRLAVHTEDHPMEYATFEGVIPKGEYGAGKMTIWDRGTYETLKWEDYE
VDVVLHGGRVDGHFTFLKRSDGWIVRRRGASQDPDWQPLPDEMKPMLATIGPMPPAGQGG
KWAYEFKWDGVRALVRVEGGRLQIYSRAGNDVTASYPELADLGKQMGSAQAWLDGEIVAF
AGGKPSFAELQKRMHVSNSAQARKLVSQTPVSLLLFDLLHFEGRSLLKSPFADRRALLEK
LGLKGSHWYTSPSYPAAGAAVLAASRQQGLEGVIAKRLDSRYTPGRSPAWIKVADVRPQE
VVIGGWRPGEGRREGVLGALLLGVPDEGGLRFVGSVGTGFSDAELESLTERLRPLGRKTS
PFNGKLPPERARGANWVEPELVGEVVFRIWTTDGRMRAPVWRGLRADKSPDEVELNG
NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt
gtgtcgggtgatctgacggagtaccgcaagaagcgtgacgccgcgcgtacgccggaaccc
gtgcctcacgaggccgtgctcccgcacggtgacgacgacacgttcgtcatccaggagcac
cacgcccgccagttgcactgggacgtccgcctggaacgcggtggtgtgctggtgtcgtgg
gcggtgcccaagggcctgccgaccgatccgaagaccgtgcgcctcgcggtgcacaccgag
gaccacccgatggagtacgccaccttcgagggcgtgatcccgaagggtgagtacggcgcc
gggaagatgaccatctgggaccgcggcacgtacgaaacgctcaagtgggaggactacgag
gtcgacgtggtcctgcacggcggccgtgtcgacggccacttcaccttcctcaagcgcagc
gatggctggatcgtgcgcaggcgcggcgcgtcgcaggacccggactggcagccgctgccg
gacgagatgaagcccatgctggccacgatcggcccgatgcccccggccgggcaaggcggc
aaatgggcgtacgagttcaaatgggacggcgtccgcgcgctcgtccgcgtcgagggcgga
cggctgcagatctacagccgcgcgggtaacgacgtcacggccagctacccggagctcgcc
gacctgggcaagcagatgggcagcgcccaggcctggctggacggtgagatcgtcgcgttc
gcgggcgggaaaccgagcttcgccgagctgcagaagcggatgcacgtcagcaactcggca
caggcgcgcaaactggtcagccagaccccggtcagcctgctgctgttcgacctgttgcac
ttcgagggccggtcgctgctgaagtcgccgttcgccgaccgccgcgccctgttggagaag
ctcggcctgaagggcagccactggtacacctcgccgtcgtatcccgccgccggtgcggcc
gtgctggcggccagcaggcagcaggggctggaaggcgtgatcgccaagcggctcgactcg
cgttacacgcccggccggtccccggcgtggatcaaggtcgccgacgtgcggccgcaggag
gtggtgatcggcggctggcggccgggggaaggccgccgggaaggcgtgcttggcgcgttg
ctgctcggggtacccgatgagggtggcctcaggttcgtcggttcggtcggaacggggttc
tccgacgcggagttggagtcgctcaccgaacggctgcgtcccctcggccgcaagacctca
ccgttcaacggcaagctcccgccggaacgcgcgcgcggcgcgaactgggtcgagccggag
ctggtcggcgaggtggtgttccggatctggacgaccgacggccggatgcgcgcaccggtg
tggcgtggcctgcgcgcggacaagtcaccggacgaggtggagctcaatggctga

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