KEGG   Kibdelosporangium phytohabitans: AOZ06_15235Help
Entry
AOZ06_15235       CDS       T04088                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
kphy  Kibdelosporangium phytohabitans
Pathway
kphy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kphy00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AOZ06_15235
Enzymes [BR:kphy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AOZ06_15235
DNA repair and recombination proteins [BR:kphy03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AOZ06_15235
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: ALG08090
UniProt: A0A0N9HT11
LinkDB All DBs
Position
3278576..3279454
Genome map
AA seq 292 aa AA seqDB search
MADQLVKVEDRTLKLTNMTKVLYPETGFTKAQVIDYYARIAPVLLPHLRDRPVTLRRYPN
GVDGQSFFEKNVARHAPEWVRTERLPTPGSSQGNESLDFVLVQDLPTLVWVANLAALELH
VPQWRVGVDPDLLVFDLDPGPPATVVECCQVALWLREELAEGGYEAYPKTSGSKGMQLYV
PVGPDEIDTLAYSRKLAERLAREYPRQVVATMAKAQRGGKVFIDWSQNRPAKTTIAPYSL
RARARPTVSTPVTWQEVEECDHVDDLTFTADEVRARAGELGDLLAYPRVPAE
NT seq 879 nt NT seq  +upstreamnt  +downstreamnt
atggctgaccagctggtgaaggtcgaggaccgcacgctcaagctcacgaacatgaccaag
gtgctctacccggagaccggcttcaccaaggcgcaggtgatcgactactacgccaggatc
gcgcccgtgctgctgccgcacctgcgcgaccgcccggtgacgttgcgccggtaccccaac
ggtgtcgacggccagtcgttcttcgagaagaacgtggcacggcacgcaccggagtgggtg
cgcaccgagcggctgccgacgcccggcagcagccagggcaacgagtcactcgacttcgtg
ctggtccaggacctgccgacgctggtgtgggtggccaacctggccgcgctggagctgcac
gttccacagtggagagtcggtgtcgatccggacctgctggtgttcgacctcgaccccggc
ccgcccgcgaccgtcgtcgagtgctgccaggtcgcgctgtggctgcgcgaggagctggcc
gagggcggctacgaggcgtacccgaagaccagcgggtccaagggcatgcagctctacgtc
ccggtcggcccggacgagatcgacaccctggcgtattcgcgcaagctcgccgagcggctg
gcacgggagtacccgcggcaggtcgtcgccacgatggccaaggcgcagcgcggcgggaag
gtgttcatcgactggagccagaaccggcccgccaagaccacgatcgcgccgtactcgctg
cgcgctcgggcccggccgaccgtctcgacgccggtgacctggcaggaagtggaggagtgc
gatcacgtcgacgatctgaccttcaccgcggacgaggtccgcgcgcgggccggcgaattg
ggcgatctgctcgcctatccacgggtgccggcggaatga

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