KEGG   Kibdelosporangium phytohabitans: AOZ06_22765
Entry
AOZ06_22765       CDS       T04088                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kphy  Kibdelosporangium phytohabitans
Pathway
kphy03030  DNA replication
kphy03410  Base excision repair
kphy03420  Nucleotide excision repair
kphy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kphy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AOZ06_22765
   03410 Base excision repair
    AOZ06_22765
   03420 Nucleotide excision repair
    AOZ06_22765
   03430 Mismatch repair
    AOZ06_22765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kphy03032]
    AOZ06_22765
   03400 DNA repair and recombination proteins [BR:kphy03400]
    AOZ06_22765
Enzymes [BR:kphy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AOZ06_22765
DNA replication proteins [BR:kphy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AOZ06_22765
DNA repair and recombination proteins [BR:kphy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AOZ06_22765
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AOZ06_22765
   MMR (mismatch excision repair)
    DNA ligase
     AOZ06_22765
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AOZ06_22765
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_5 HHH_2 DNA_ligase_ZBD BRCT HHH RNA_ligase
Other DBs
NCBI-ProteinID: ALG09356
UniProt: A0A0N9I3M2
LinkDB
Position
complement(4997674..4999665)
AA seq 663 aa
MNTGEKIQELADRVMVLRDAYYRGSPLVADAEYDAVEDELRTLIDANPELAPDPNPLDQV
GAPSVLHAPIRHSRPMLSLEKATKPEQVVAFFDRFPGQPVAVMPKLDGLSLALVYEDGRL
SRAITRGDGTTGDDVTILTRALIDGVPPRIPAQGRVEVRGEAVMLRSTFTAYNTAHPDKP
LINPRGAAAGTLRAKDPATVAERRLQFFAFDLDTSTDDAAADLAEGLSTLGFTAADMRHC
ADASAAQEVIEAIEQQRNELDYDLDGAVLRLANRDAFAAAGTRSSSPRGALAYKFAAEEK
TTILADVLWDVGKTGKIAPVAQLEPVFVGGTTVTRATLANQEVIRARGIRIGDTVLVRRA
GDVIPFVAGVLDASKRTGAEREIVPPAACPSCGQPVTEQGNSRELFCTNVSCPAQTVRRL
VHWASRAAADIEAVGPMWIERLAEAGHLENPSDFYLLTKETLLEFDRIGEVSATRMIESI
DASRVVGLRRALIGLAIPMASEGTATRLCRAGFGSLEEVADAGEERLVAVEDIGPKVAAS
LTAHLARLRPELERLRDNGVSLDVRDEDLPPVVAADAPLAGKTVVITGTISDPRTGEKVP
RPTFQRLCEKAGATAASSVSASTDMLITGADVGASKITKAEKLEVEVVDQGQIWQQLIAA
GVA
NT seq 1992 nt   +upstreamnt  +downstreamnt
gtgaacactggggagaagatccaggaactcgccgaccgggtgatggtgctgcgcgacgcg
tactaccggggttcgccgctggtggcggacgccgagtacgacgcggtcgaggacgagctg
cggacgctgatcgacgccaacccggagttggcgcccgatccgaacccgctcgaccaggtg
ggcgcgccgtccgtgctgcacgcgccgatccggcactcgcggccgatgctgtcgctggag
aaggccacgaaacccgagcaggtcgtggcgttcttcgaccgtttccccggccagcccgtc
gcggtcatgccgaagctggacggcctgtcgttggcgctggtctacgaggacggccggttg
agccgcgcgatcacccgcggcgacggcacgacgggcgacgacgtgaccatcctgacgcgg
gccttgatcgacggcgtgccgccgcgcatccccgctcaaggacgtgtcgaggtgcgtggt
gaggcggtgatgctgcggtccacgttcaccgcgtacaacaccgcgcacccggacaaaccg
ttgatcaacccgcgtggcgccgccgcgggcaccctgcgtgccaaggatccggccacggtc
gccgagcggcgcctgcagttcttcgccttcgacctggacacctcgaccgacgatgccgcg
gcggacctcgccgagggcctgagcacactcgggttcaccgcggccgacatgcggcactgt
gccgacgcgagcgcggcgcaggaggtcatcgaagcgatcgagcagcagcgcaacgaactc
gactacgacctcgacggcgccgtgttgcggttggccaaccgtgacgcgttcgccgctgcc
gggacgaggtcgagctcgccccgcggcgcgctggcgtacaagttcgccgccgaggagaag
accacgatcctggccgacgtgctgtgggacgtgggcaagacggggaagatcgcgccggtc
gcccagctcgagccggtgttcgtcggtggcacgacggtcacccgtgcgaccctggccaac
caggaggtcatccgcgcccgtggcatcaggatcggcgacaccgtgctggtgcgccgcgcc
ggtgacgtgatcccgttcgtcgccggtgtgctcgacgcgtcgaaacgcacgggcgccgag
cgcgagatcgtgccgcccgccgcgtgcccgtcgtgcgggcagcccgtgaccgagcaggga
aacagtcgcgaacttttctgcaccaacgtctcctgtcccgcgcagaccgtgcggcggttg
gtgcactgggcttcgcgcgcggcggcggacatcgaggccgtcggtccgatgtggatcgag
cggctcgccgaggcggggcacttggagaacccgtcggacttctacttgctgaccaaggag
acgttgctggagttcgaccggatcggcgaggtctcggccacgcgcatgatcgagtcgatc
gacgccagccgcgtcgtcgggctgcgccgcgcgttgatcggcctggccatcccgatggcc
tcggagggcacggcgacccggttgtgccgcgcgggattcgggtcgctggaggaggtcgcg
gacgccggggaggaacggctcgtcgccgtggaggacatcggtccgaaggtcgccgcctcg
ctgaccgcgcacctcgcccggttgcggccggagctcgaacggttgcgggacaacggggtc
tcgttggacgtgcgcgacgaagacctcccaccggtcgtcgcagccgacgcgccgctggcg
ggcaagacagtcgtgatcacgggcacgatcagcgacccgcgcacgggcgagaaagtcccc
cgccccactttccagcggctgtgcgagaaagcaggcgccaccgccgcgtcgtcggtgtcc
gccagcaccgacatgctcatcaccggcgcggacgtcggcgcgagcaagatcaccaaggcc
gagaaactcgaagtcgaggtcgtcgaccagggtcagatctggcagcagctgatcgccgcg
ggcgtcgcctga

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