Kibdelosporangium phytohabitans: AOZ06_22765
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Entry
AOZ06_22765 CDS
T04088
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
kphy
Kibdelosporangium phytohabitans
Pathway
kphy03030
DNA replication
kphy03410
Base excision repair
kphy03420
Nucleotide excision repair
kphy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOZ06_22765
03410 Base excision repair
AOZ06_22765
03420 Nucleotide excision repair
AOZ06_22765
03430 Mismatch repair
AOZ06_22765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kphy03032
]
AOZ06_22765
03400 DNA repair and recombination proteins [BR:
kphy03400
]
AOZ06_22765
Enzymes [BR:
kphy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AOZ06_22765
DNA replication proteins [BR:
kphy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOZ06_22765
DNA repair and recombination proteins [BR:
kphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AOZ06_22765
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOZ06_22765
MMR (mismatch excision repair)
DNA ligase
AOZ06_22765
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AOZ06_22765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_5
HHH_2
DNA_ligase_ZBD
BRCT
HHH
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ALG09356
UniProt:
A0A0N9I3M2
LinkDB
All DBs
Position
complement(4997674..4999665)
Genome browser
AA seq
663 aa
AA seq
DB search
MNTGEKIQELADRVMVLRDAYYRGSPLVADAEYDAVEDELRTLIDANPELAPDPNPLDQV
GAPSVLHAPIRHSRPMLSLEKATKPEQVVAFFDRFPGQPVAVMPKLDGLSLALVYEDGRL
SRAITRGDGTTGDDVTILTRALIDGVPPRIPAQGRVEVRGEAVMLRSTFTAYNTAHPDKP
LINPRGAAAGTLRAKDPATVAERRLQFFAFDLDTSTDDAAADLAEGLSTLGFTAADMRHC
ADASAAQEVIEAIEQQRNELDYDLDGAVLRLANRDAFAAAGTRSSSPRGALAYKFAAEEK
TTILADVLWDVGKTGKIAPVAQLEPVFVGGTTVTRATLANQEVIRARGIRIGDTVLVRRA
GDVIPFVAGVLDASKRTGAEREIVPPAACPSCGQPVTEQGNSRELFCTNVSCPAQTVRRL
VHWASRAAADIEAVGPMWIERLAEAGHLENPSDFYLLTKETLLEFDRIGEVSATRMIESI
DASRVVGLRRALIGLAIPMASEGTATRLCRAGFGSLEEVADAGEERLVAVEDIGPKVAAS
LTAHLARLRPELERLRDNGVSLDVRDEDLPPVVAADAPLAGKTVVITGTISDPRTGEKVP
RPTFQRLCEKAGATAASSVSASTDMLITGADVGASKITKAEKLEVEVVDQGQIWQQLIAA
GVA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gtgaacactggggagaagatccaggaactcgccgaccgggtgatggtgctgcgcgacgcg
tactaccggggttcgccgctggtggcggacgccgagtacgacgcggtcgaggacgagctg
cggacgctgatcgacgccaacccggagttggcgcccgatccgaacccgctcgaccaggtg
ggcgcgccgtccgtgctgcacgcgccgatccggcactcgcggccgatgctgtcgctggag
aaggccacgaaacccgagcaggtcgtggcgttcttcgaccgtttccccggccagcccgtc
gcggtcatgccgaagctggacggcctgtcgttggcgctggtctacgaggacggccggttg
agccgcgcgatcacccgcggcgacggcacgacgggcgacgacgtgaccatcctgacgcgg
gccttgatcgacggcgtgccgccgcgcatccccgctcaaggacgtgtcgaggtgcgtggt
gaggcggtgatgctgcggtccacgttcaccgcgtacaacaccgcgcacccggacaaaccg
ttgatcaacccgcgtggcgccgccgcgggcaccctgcgtgccaaggatccggccacggtc
gccgagcggcgcctgcagttcttcgccttcgacctggacacctcgaccgacgatgccgcg
gcggacctcgccgagggcctgagcacactcgggttcaccgcggccgacatgcggcactgt
gccgacgcgagcgcggcgcaggaggtcatcgaagcgatcgagcagcagcgcaacgaactc
gactacgacctcgacggcgccgtgttgcggttggccaaccgtgacgcgttcgccgctgcc
gggacgaggtcgagctcgccccgcggcgcgctggcgtacaagttcgccgccgaggagaag
accacgatcctggccgacgtgctgtgggacgtgggcaagacggggaagatcgcgccggtc
gcccagctcgagccggtgttcgtcggtggcacgacggtcacccgtgcgaccctggccaac
caggaggtcatccgcgcccgtggcatcaggatcggcgacaccgtgctggtgcgccgcgcc
ggtgacgtgatcccgttcgtcgccggtgtgctcgacgcgtcgaaacgcacgggcgccgag
cgcgagatcgtgccgcccgccgcgtgcccgtcgtgcgggcagcccgtgaccgagcaggga
aacagtcgcgaacttttctgcaccaacgtctcctgtcccgcgcagaccgtgcggcggttg
gtgcactgggcttcgcgcgcggcggcggacatcgaggccgtcggtccgatgtggatcgag
cggctcgccgaggcggggcacttggagaacccgtcggacttctacttgctgaccaaggag
acgttgctggagttcgaccggatcggcgaggtctcggccacgcgcatgatcgagtcgatc
gacgccagccgcgtcgtcgggctgcgccgcgcgttgatcggcctggccatcccgatggcc
tcggagggcacggcgacccggttgtgccgcgcgggattcgggtcgctggaggaggtcgcg
gacgccggggaggaacggctcgtcgccgtggaggacatcggtccgaaggtcgccgcctcg
ctgaccgcgcacctcgcccggttgcggccggagctcgaacggttgcgggacaacggggtc
tcgttggacgtgcgcgacgaagacctcccaccggtcgtcgcagccgacgcgccgctggcg
ggcaagacagtcgtgatcacgggcacgatcagcgacccgcgcacgggcgagaaagtcccc
cgccccactttccagcggctgtgcgagaaagcaggcgccaccgccgcgtcgtcggtgtcc
gccagcaccgacatgctcatcaccggcgcggacgtcggcgcgagcaagatcaccaaggcc
gagaaactcgaagtcgaggtcgtcgaccagggtcagatctggcagcagctgatcgccgcg
ggcgtcgcctga
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