Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1): A79E_4507
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Entry
A79E_4507 CDS
T02213
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kpp
Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1)
Pathway
kpp03420
Nucleotide excision repair
kpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A79E_4507
03430 Mismatch repair
A79E_4507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpp03400
]
A79E_4507
Enzymes [BR:
kpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A79E_4507
DNA repair and recombination proteins [BR:
kpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A79E_4507
MMR (mismatch excision repair)
Other MMR factors
A79E_4507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_22
AAA_30
PhoH
Rhamnogal_lyase
Motif
Other DBs
NCBI-ProteinID:
AFQ67718
LinkDB
All DBs
Position
4781128..4782801
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AA seq
557 aa
AA seq
DB search
MTSQWLPSEGIEPTQELMDIIFCDQSVSVLAGAGAGKTELLAQKSNYLLQTGKCMWPKRI
LCLSYKKEAQENIKTRVMKRCGQRGERFDSYTFDAFCKSIVDRFKDVLPENKRPLNNYDL
VFNQKANNGKDKISFDLIRSLALDILTIRTDIVDLFSLTYSHVFIDEFQDTRSDQYEMIK
LLFKDKGTQLLAVGDINQSIMLWAGAKKTVFEDCEKEFNTTKKLLVHNFRASEEIQEVLR
CFIHFVQNDANFTPIIKSIDNCTIHYYDNELSEADDIADKIARFITSGIEEKEICVLVKQ
QSEQYTEKLRDKLTTKGIRNLDLSELQDVLKEPLGQIFAALFKVYTSRSSSSYTELCDLY
LELHRVSRGDEKEDALIKVLSDNIAENKKNLGDEPSPDSLITCIKDIITLFGVKRMVGRW
NQYKSADYWDKIWRNLEQHLRYTIDATHSLNEAALMFQAENSVQVMNVHKCKGLEYKVVI
FLGLEDQAFWAYKNAKFENDCALYVALSRAKESIIITSTKCREHRITNWRDDRTSTYKNI
GPIYSFLTKHCKFREVR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcaatggctaccttctgagggcattgagccgacacaggagttaatggatatt
atattctgtgatcaatccgtttctgtacttgctggcgcgggggcgggtaaaacggagctt
ttagctcagaaatctaattacttgttgcagacaggaaagtgcatgtggcctaaacgcata
ttatgcctttcatataaaaaagaggcgcaagagaatatcaaaacacgtgtgatgaaaaga
tgtggacaaagaggtgagcgctttgattcgtatactttcgatgctttttgcaagagtatt
gttgaccgttttaaagatgttttgcctgagaataaaagacccttaaacaattatgattta
gtgtttaatcagaaagccaataatggcaaggataagatatcatttgatctaataaggagt
ttggcattagatattttaacaattagaacggatattgttgatcttttttcgttgacgtat
tcacatgtttttatcgatgagtttcaagatacccgctctgatcagtatgaaatgattaag
cttctttttaaagacaaaggaacgcaattgctagcggtgggcgatatcaaccaaagcatt
atgttgtgggctggtgccaagaaaacagtgtttgaagattgtgaaaaagagtttaataca
accaaaaaactattggtgcataattttagagctagtgaggaaattcaagaggtcttaaga
tgctttattcattttgtacaaaatgatgctaactttacgccaataatcaaaagtatcgat
aattgcactattcactattatgataatgagctttctgaagcggatgatattgctgataaa
atcgcaagattcatcacttctggcattgaagaaaaagagatttgtgtactggttaaacag
cagtcagagcaatatacggaaaaacttcgagataagttaacgactaaagggattagaaat
cttgatttatcggaattgcaagatgtgttaaaagaaccattagggcaaatatttgctgcg
ctcttcaaggtttatacatcacgctcatcatcaagctataccgagctttgtgatttatat
cttgagttgcatcgagtctcccgcggcgatgaaaaagaagatgcattaattaaagtattg
tcggataacatagcggaaaataagaaaaatttaggcgatgagcctagccccgattcattg
ataacctgcattaaggatattataactctatttggtgtgaaaagaatggtggggcgatgg
aatcagtataagtccgctgattattgggataagatctggcgtaatcttgagcaacatttg
cgctacacaatagacgcaacacactctcttaacgaggcggcgttgatgtttcaggcggaa
aattccgttcaggtgatgaacgtgcataaatgcaagggactggaatataaagtggttatt
tttcttggcttagaggaccaagctttttgggcttataaaaacgcaaaatttgaaaatgat
tgcgctctctatgttgctttatccagggctaaagaaagtataataataacttctacaaaa
tgtagagagcatagaatcactaattggcgagatgatagaacctctacctataaaaatatt
ggtcctatatattcgttcttaacgaaacattgcaagtttagggaggtgagataa
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