Kineococcus radiotolerans: Krad_0681
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Entry
Krad_0681 CDS
T00562
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kra
Kineococcus radiotolerans
Pathway
kra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Krad_0681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kra03021
]
Krad_0681
03400 DNA repair and recombination proteins [BR:
kra03400
]
Krad_0681
Enzymes [BR:
kra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Krad_0681
Transcription machinery [BR:
kra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Krad_0681
DNA repair and recombination proteins [BR:
kra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Krad_0681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ABS02170
UniProt:
A6W5T1
LinkDB
All DBs
Position
complement(1593919..1597800)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDDEARQRDFSSLEAQIEVEKREVENRRDSDVETRAKTLEQD
LAELEAEGAKSDVRRKVRESAEREMAQIRRRADAEIDRLATIWDRFRTLKVQDLEGDEVL
YRAMRERFGLYFEGGMGAAALQKRLQSFDLEAEAESLRETIATGKGQRKTRALKRLKVVS
AFLTTRNSPEGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLSHAQNIKSAKRMVERAR
PVVWDVLSEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMIIGLYHLTADRDDVAGEGR
QFSSLAEAIMAFDAKQLNLNAKVRIRLSGVVPTSAMALPEDWQQGDDLDVETTLGRALFN
ETLPVDYEYVNVVVDKKQLSAIVNDLAERYPKVQVAATLDALKEAGFHWATRSGTTVSIA
DVVTPPNKQAILETYEAKAEKVQQQYERGLITDDERRQELIEIWTQATNDVAKDLEAAMP
THNTIHRMVSSGARGNWMQMRQLAGMRGLMANPKGEIIPRPVKASFREGLTVGEFFITTH
GARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTFRGLSMPIAEKNSDGSLRRHD
DVETSVYARTLATDVVVDGEVVLPAGSDLGDVVIDALVERGVESLKVRSVLTCESRVGTC
ARCYGRSLASGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHTGGAASESGDITHGLPRVV
ELFEARTPKGNAPISEVAGRTRIEETDKGRKIVVTPDDGAEEVEYPVTRRQRLLVEDGTH
VEVGQKLVQGAVDPKQVLRILGPRRVQMHLVDEVQEVYRSQGVSIHDKHIEVIVRQMLKR
VTIIEQNGSELLPGELVERARFEEENRRVMAEGGQPSSGRPELMGITKASLATDSWLSAA
SFQETTRVLTNAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYRNVRVEPTEEAKAQMYS
VPGYDDVDYAQFGVGSGQAVPLEEFDYGSSDYR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacttcttcgacgagctgcgcatcgggcttgccaccgcggaggacatc
cgcacgtggtcgcacggtgaggtcaagaagccggaaaccatcaactaccgcaccctgaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacgcgggccaaggtccgtcgtgagcgcatggggcacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtcccgagccggctgggctacctgctcgacctg
gcccccaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtcggtcgac
gacgaggcccgccagcgcgacttctcctcgctggaggcccagatcgaggtcgagaagcgc
gaggtggagaaccgtcgggactccgacgtcgagacccgcgccaagaccctcgagcaggac
ctcgccgagctcgaggccgagggcgcgaagtcggacgtgcgccgcaaggtgcgcgagtcc
gccgagcgcgagatggcgcagatccgtcgtcgcgccgacgccgagatcgaccgcctggcc
acgatctgggaccgcttccgcaccctcaaggtccaggacctcgagggcgacgaggtgctc
taccgcgccatgcgcgagcgcttcggcctatacttcgagggcggcatgggcgcggcggcg
ctgcagaagcgcctccagagcttcgacctcgaggccgaggccgagtccctgcgtgagacc
atcgcgacgggcaagggccagcgcaagacccgcgccctcaagcgcctcaaggtcgtctcg
gcgttcctcaccacgcggaactcccccgagggcatggtcctcgactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacgagcgacctg
aacgacctctaccgccgcgtcatcaaccgcaacaaccggttgaagcgcctgctcgacctc
ggggcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccggccggtgacgggcccgggcaaccgcccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggccctggagctcttcaagcccttcgtcatgaagcggctc
gtcgacctcagccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcgcccgc
ccggtggtctgggacgtcctgtccgaggtcatcaccgagcacccggtgctgctcaaccgc
gcgcccacgctgcaccgcctcggcatccaggccttcgagccccagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggcgaccag
atggccgtgcacgtgccgctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgtcgaacaacatcctcaagccggcggacggccgtccggtgaccatgcccacccaggac
atgatcatcggtctgtaccacctgaccgccgaccgggacgacgtggccggggagggccgg
cagttctcctcgctggccgaggcgatcatggccttcgacgccaagcagctgaacctcaac
gccaaggtgcgcatccgcctgtcgggtgtcgtcccgacgtcggccatggcgctgcccgag
gactggcagcagggcgacgacctcgacgtggagaccacgctggggcgggcgctgttcaac
gagacgctgccggtggactacgagtacgtcaacgtcgtcgtggacaagaagcagctctcc
gcgatcgtcaacgacctcgccgagcgctacccgaaggtccaggtggcggcgacgctggac
gccctgaaggaggccggcttccactgggccacccgctcgggcaccaccgtctccatcgcc
gacgtcgtgacgccgccgaacaagcaggccatcctcgagacctacgaggccaaggccgag
aaggtccagcagcagtacgagcggggtctgatcaccgacgacgagcgccgtcaggagctc
atcgagatctggacccaggccaccaacgacgtcgccaaggacctcgaggcggccatgccg
acgcacaacacgatccaccgcatggtgagctcgggtgcgcgaggcaactggatgcagatg
cgtcagctcgccggcatgcgcggcctgatggccaacccgaagggcgagatcatcccgcgc
ccggtcaaggcctcgttccgcgagggcctgaccgtgggtgagttcttcatcaccacgcac
ggcgcccgcaaggggctggcggacaccgcgctgcggaccgccgactccgggtacctgacg
cgtcgactcgtcgacgtctcccaggacgtcatcgtccgcgaggacgactgcggcaccttc
cgcggcctgtcgatgcccatcgcggagaagaactccgacggcagcctgcgccgccacgac
gacgtcgagaccagcgtctacgcacgcacgctggccaccgacgtggtcgtcgacggggag
gtcgtcctgccggccgggtccgacctgggcgacgtcgtcatcgacgccctggtcgagcgc
ggcgtggagagcctcaaggtccgctcggtgctcacctgcgagtcccgcgtggggacctgc
gcccgctgctacggccgttcgctggccagcggcaagctcgtcgacatcggcgaggccgtc
ggcatcgtcgcggcccagtcgatcggcgagcccggcacccagctgacgatgcgcaccttc
cacaccggtggtgccgcgtcggagtccggtgacatcacgcacggtctgccgcgcgtggtc
gagctcttcgaggcccgcacccccaaggggaacgcgccgatctccgaggtcgcggggcgc
acccgcatcgaggagaccgacaagggccgcaagatcgtcgtcacccccgacgacggcgcc
gaagaggtcgagtacccggtgacgcgtcgtcagcgcctcctcgtggaggacggcacgcac
gtcgaggtcgggcagaagctcgtccagggtgcggtcgaccccaagcaggtgctgcgcatc
ctcggcccgcgccgggtgcagatgcacctggtcgacgaggtgcaggaggtctaccgctcc
cagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccgccagatgctcaagcgg
gtgacgatcatcgagcagaacggttcggagctgctgcccggtgagctcgtcgagcgcgcg
cgcttcgaggaggagaaccgccgggtcatggccgagggcggtcagccgtcctcgggtcgc
ccggagctcatgggcatcacgaaggcgtcgctcgcgaccgactcgtggctgtccgccgcc
tccttccaggagacgacgcgcgtcctgaccaacgcggccatggagggcaagagcgacccg
ctgctcgggctcaaggagaacgtcatcatcggcaagctcatcccggccggcacggggctc
ccgcgctaccgcaacgtccgggtggagccgaccgaggaagccaaggcgcagatgtactcg
gtgcccggctacgacgacgtcgactacgcgcagttcggcgtgggctccggccaggccgtg
ccgctcgaggagttcgactacggcagcagcgactaccgctga
DBGET
integrated database retrieval system