KEGG   Kineococcus radiotolerans: Krad_0681
Entry
Krad_0681         CDS       T00562                                 
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
kra  Kineococcus radiotolerans
Pathway
kra03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Krad_0681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kra03021]
    Krad_0681
   03400 DNA repair and recombination proteins [BR:kra03400]
    Krad_0681
Enzymes [BR:kra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Krad_0681
Transcription machinery [BR:kra03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Krad_0681
DNA repair and recombination proteins [BR:kra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Krad_0681
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: ABS02170
UniProt: A6W5T1
LinkDB
Position
complement(1593919..1597800)
AA seq 1293 aa
MLDVNFFDELRIGLATAEDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDDEARQRDFSSLEAQIEVEKREVENRRDSDVETRAKTLEQD
LAELEAEGAKSDVRRKVRESAEREMAQIRRRADAEIDRLATIWDRFRTLKVQDLEGDEVL
YRAMRERFGLYFEGGMGAAALQKRLQSFDLEAEAESLRETIATGKGQRKTRALKRLKVVS
AFLTTRNSPEGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLSHAQNIKSAKRMVERAR
PVVWDVLSEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMIIGLYHLTADRDDVAGEGR
QFSSLAEAIMAFDAKQLNLNAKVRIRLSGVVPTSAMALPEDWQQGDDLDVETTLGRALFN
ETLPVDYEYVNVVVDKKQLSAIVNDLAERYPKVQVAATLDALKEAGFHWATRSGTTVSIA
DVVTPPNKQAILETYEAKAEKVQQQYERGLITDDERRQELIEIWTQATNDVAKDLEAAMP
THNTIHRMVSSGARGNWMQMRQLAGMRGLMANPKGEIIPRPVKASFREGLTVGEFFITTH
GARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTFRGLSMPIAEKNSDGSLRRHD
DVETSVYARTLATDVVVDGEVVLPAGSDLGDVVIDALVERGVESLKVRSVLTCESRVGTC
ARCYGRSLASGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHTGGAASESGDITHGLPRVV
ELFEARTPKGNAPISEVAGRTRIEETDKGRKIVVTPDDGAEEVEYPVTRRQRLLVEDGTH
VEVGQKLVQGAVDPKQVLRILGPRRVQMHLVDEVQEVYRSQGVSIHDKHIEVIVRQMLKR
VTIIEQNGSELLPGELVERARFEEENRRVMAEGGQPSSGRPELMGITKASLATDSWLSAA
SFQETTRVLTNAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYRNVRVEPTEEAKAQMYS
VPGYDDVDYAQFGVGSGQAVPLEEFDYGSSDYR
NT seq 3882 nt   +upstreamnt  +downstreamnt
ttgctcgacgtcaacttcttcgacgagctgcgcatcgggcttgccaccgcggaggacatc
cgcacgtggtcgcacggtgaggtcaagaagccggaaaccatcaactaccgcaccctgaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacgcgggccaaggtccgtcgtgagcgcatggggcacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtcccgagccggctgggctacctgctcgacctg
gcccccaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtcggtcgac
gacgaggcccgccagcgcgacttctcctcgctggaggcccagatcgaggtcgagaagcgc
gaggtggagaaccgtcgggactccgacgtcgagacccgcgccaagaccctcgagcaggac
ctcgccgagctcgaggccgagggcgcgaagtcggacgtgcgccgcaaggtgcgcgagtcc
gccgagcgcgagatggcgcagatccgtcgtcgcgccgacgccgagatcgaccgcctggcc
acgatctgggaccgcttccgcaccctcaaggtccaggacctcgagggcgacgaggtgctc
taccgcgccatgcgcgagcgcttcggcctatacttcgagggcggcatgggcgcggcggcg
ctgcagaagcgcctccagagcttcgacctcgaggccgaggccgagtccctgcgtgagacc
atcgcgacgggcaagggccagcgcaagacccgcgccctcaagcgcctcaaggtcgtctcg
gcgttcctcaccacgcggaactcccccgagggcatggtcctcgactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacgagcgacctg
aacgacctctaccgccgcgtcatcaaccgcaacaaccggttgaagcgcctgctcgacctc
ggggcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccggccggtgacgggcccgggcaaccgcccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggccctggagctcttcaagcccttcgtcatgaagcggctc
gtcgacctcagccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcgcccgc
ccggtggtctgggacgtcctgtccgaggtcatcaccgagcacccggtgctgctcaaccgc
gcgcccacgctgcaccgcctcggcatccaggccttcgagccccagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggcgaccag
atggccgtgcacgtgccgctgagcgcggaggcgcaggccgaggcccgcatcctcatgctc
tcgtcgaacaacatcctcaagccggcggacggccgtccggtgaccatgcccacccaggac
atgatcatcggtctgtaccacctgaccgccgaccgggacgacgtggccggggagggccgg
cagttctcctcgctggccgaggcgatcatggccttcgacgccaagcagctgaacctcaac
gccaaggtgcgcatccgcctgtcgggtgtcgtcccgacgtcggccatggcgctgcccgag
gactggcagcagggcgacgacctcgacgtggagaccacgctggggcgggcgctgttcaac
gagacgctgccggtggactacgagtacgtcaacgtcgtcgtggacaagaagcagctctcc
gcgatcgtcaacgacctcgccgagcgctacccgaaggtccaggtggcggcgacgctggac
gccctgaaggaggccggcttccactgggccacccgctcgggcaccaccgtctccatcgcc
gacgtcgtgacgccgccgaacaagcaggccatcctcgagacctacgaggccaaggccgag
aaggtccagcagcagtacgagcggggtctgatcaccgacgacgagcgccgtcaggagctc
atcgagatctggacccaggccaccaacgacgtcgccaaggacctcgaggcggccatgccg
acgcacaacacgatccaccgcatggtgagctcgggtgcgcgaggcaactggatgcagatg
cgtcagctcgccggcatgcgcggcctgatggccaacccgaagggcgagatcatcccgcgc
ccggtcaaggcctcgttccgcgagggcctgaccgtgggtgagttcttcatcaccacgcac
ggcgcccgcaaggggctggcggacaccgcgctgcggaccgccgactccgggtacctgacg
cgtcgactcgtcgacgtctcccaggacgtcatcgtccgcgaggacgactgcggcaccttc
cgcggcctgtcgatgcccatcgcggagaagaactccgacggcagcctgcgccgccacgac
gacgtcgagaccagcgtctacgcacgcacgctggccaccgacgtggtcgtcgacggggag
gtcgtcctgccggccgggtccgacctgggcgacgtcgtcatcgacgccctggtcgagcgc
ggcgtggagagcctcaaggtccgctcggtgctcacctgcgagtcccgcgtggggacctgc
gcccgctgctacggccgttcgctggccagcggcaagctcgtcgacatcggcgaggccgtc
ggcatcgtcgcggcccagtcgatcggcgagcccggcacccagctgacgatgcgcaccttc
cacaccggtggtgccgcgtcggagtccggtgacatcacgcacggtctgccgcgcgtggtc
gagctcttcgaggcccgcacccccaaggggaacgcgccgatctccgaggtcgcggggcgc
acccgcatcgaggagaccgacaagggccgcaagatcgtcgtcacccccgacgacggcgcc
gaagaggtcgagtacccggtgacgcgtcgtcagcgcctcctcgtggaggacggcacgcac
gtcgaggtcgggcagaagctcgtccagggtgcggtcgaccccaagcaggtgctgcgcatc
ctcggcccgcgccgggtgcagatgcacctggtcgacgaggtgcaggaggtctaccgctcc
cagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccgccagatgctcaagcgg
gtgacgatcatcgagcagaacggttcggagctgctgcccggtgagctcgtcgagcgcgcg
cgcttcgaggaggagaaccgccgggtcatggccgagggcggtcagccgtcctcgggtcgc
ccggagctcatgggcatcacgaaggcgtcgctcgcgaccgactcgtggctgtccgccgcc
tccttccaggagacgacgcgcgtcctgaccaacgcggccatggagggcaagagcgacccg
ctgctcgggctcaaggagaacgtcatcatcggcaagctcatcccggccggcacggggctc
ccgcgctaccgcaacgtccgggtggagccgaccgaggaagccaaggcgcagatgtactcg
gtgcccggctacgacgacgtcgactacgcgcagttcggcgtgggctccggccaggccgtg
ccgctcgaggagttcgactacggcagcagcgactaccgctga

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