Kocuria rhizophila: KRH_00060
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Entry
KRH_00060 CDS
T00701
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
krh
Kocuria rhizophila
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krh03032
]
KRH_00060 (gyrA)
03400 DNA repair and recombination proteins [BR:
krh03400
]
KRH_00060 (gyrA)
Enzymes [BR:
krh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KRH_00060 (gyrA)
DNA replication proteins [BR:
krh03032
]
Prokaryotic type
DNA Topoisomerases
KRH_00060 (gyrA)
DNA repair and recombination proteins [BR:
krh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KRH_00060 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAG28353
NITE:
KRH_00060
UniProt:
B2GIG3
LinkDB
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Position
7897..10539
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AA seq
880 aa
AA seq
DB search
MVEDVEVTSDRVEQIDLQTEMQRSYLDYAMAVIVGRALPDVRDGLKPVHRRVLYTMYDGG
YRPERSFNKCARVVGDVMGNYHPHGDSAIYDALVRLIQNWTMRYPLALGQGNFGSPGNDG
AAAPRYTETKMAPLAMEMVRDIHEDTVDFQDNYDGKQQEPTVLPSRFPNLLVNGSAGIAV
GMATNIPPHNLREVADGVQWYLQNPDVDRETLLEELIKRVKGPDFPSGAQILGHKGIEQA
YRTGRGSITQRAVVSVEEIHNRTCLVVTELPYQVNPDNLAIKIADLVKDGKVQGIADMRD
ETSGRTGQRLVIVLKRDAVPKVVLNNLYKHTQLQENFSANMLALVDGVPRTLSLDAFVHH
WVSHQMDVIVRRTRYRLKQAQEEAHILLGLLKALDALDEVIALIRRSPTVEEARNGLMEL
LGIDEAQAQAILNMQLRRLAALERQKIQDRHAELQRLIAEYEEIIASEARQRGIISEELA
EIVERYGDDRRTEVLYGFDGDVSMEDLIPQQQVVVTITRDGYVKRTRADEYRAQHRGGRG
IKGAQLRGDDVVEHFFVTNTHNWILFFTTLGRVYRVKAYEFVEAGRDAKGQHVANLMEFQ
PEERIAKVMELHSYQDAPYLVLATRNGLVKKSRLTDYDTNRSAGVIAINLRDDDELVSAM
LVDTDDDIMLISRHGQSLRFTADDDALRPMGRATSGVTGMKFRSGDELLSANVVSDDSHV
FVVTEGGYAKRTAVQEYRVQGRGGLGIKVAKLAEVRGGLVGGLIVGENDEVLVVMESGKV
VRSTVSEVPARGRDTMGVIFAKPGPNDTIVGVARNAEREIEKEVAEEDAADATGPGGVVV
AETDVAADGSVPEAEEQDGPASDAQNDAVALEDNDNGGDA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaggacgtcgaggtgacctccgaccgcgtggagcagatcgacctgcagacggag
atgcagcgctcctacctggactacgcgatggccgtgatcgtgggccgtgcgctgccggac
gtgcgggacggtctcaagcccgtgcaccgccgcgtgctctacaccatgtacgacggcggc
taccgcccggagcgctcgttcaacaagtgcgcgcgcgtggtcggcgacgtgatgggcaac
taccacccccacggcgactccgcgatctacgacgccctggtgcgtctgatccagaactgg
accatgcgctacccgctcgcgctgggccagggcaacttcggctccccgggcaacgacggc
gccgccgcgccccggtacaccgagaccaagatggcgccgctggccatggagatggtccgg
gacatccacgaggacaccgtggacttccaggacaactacgacggcaagcagcaggagccc
acggtgctgccgtcccggttcccgaacctgctggtcaacggctccgcgggcatcgcggtg
ggcatggccacgaacatcccgccgcacaacctgcgcgaggtggcggacggcgtccagtgg
tacctgcagaacccggacgtggaccgcgagaccctgctggaggagctcatcaagcgggtc
aagggcccggacttcccctcgggcgcgcagatcctgggccacaagggcatcgagcaggcc
taccgcacgggccgcggctccatcacgcagcgcgcggtggtcagtgtggaggagatccac
aaccgcacgtgcctggtggtcaccgagctgccgtaccaggtcaacccggacaacctggcc
atcaagatcgcggacctcgtcaaggacgggaaggtccagggcatcgcggacatgcgcgac
gagacctcggggcgcaccggccagcgcctggtgatcgtgctcaagcgggacgccgtgccc
aaggtggtgctcaacaacctctacaagcacacgcagctgcaggagaacttctccgcgaac
atgctcgcgctcgtggacggtgtgccgcgcacgctgtccctggacgcgttcgtgcaccac
tgggtgagccaccagatggacgtcatcgtgcggcgcacccggtaccgcctgaagcaggcg
caggaggaggcgcacatcctgctgggtctgctcaaggccctggacgcgctggacgaggtc
atcgccctgatccgccgctcccccaccgtggaagaggcccgcaacgggctcatggagctg
ctgggcatcgacgaggcccaggcccaggcgatcctcaacatgcagctgcgccgcctggcc
gccctggagcgtcagaagatccaggaccggcacgcggagctgcagcggctgatcgccgag
tacgaggagatcatcgcgtccgaggctcgccagcgcgggatcatctcggaggagctcgcg
gagatcgtggagcgctacggggacgaccgccgcaccgaggtcctctacggcttcgacggg
gacgtgtccatggaggacctcatcccgcagcagcaggtggtggtcaccatcacccgcgac
ggctacgtcaagcgcacccgcgcggacgagtaccgcgcccagcaccgcggcggccgcggc
atcaagggtgcccagctgcgcggggacgacgtcgtggagcacttcttcgtgacgaacacc
cacaactggatcctgttcttcaccaccctgggccgggtctaccgcgtcaaggcctacgag
ttcgtggaggccgggcgggacgccaagggccagcacgtggccaacctcatggagttccag
ccggaggagcggatcgccaaggtcatggagctgcactcctaccaggacgccccctacctg
gtgctggccacgcgcaacggcctggtgaagaagtcccgcctcacggactacgacaccaac
cgctccgccggggtgatcgccatcaacctgcgcgacgacgacgagctggtctcggccatg
ctcgtggacaccgacgacgacatcatgctgatctcgcgccacggccagtccctgcgcttc
accgcggacgacgacgccctgcgccccatgggccgcgcgacgtccggtgtcacgggcatg
aagttccgctccggtgacgagctgctctcggccaacgtggtcagcgacgactcccacgtg
ttcgtggtgaccgagggcggctacgccaagcgcaccgcggtgcaggagtaccgggtgcag
ggccgcggcggactgggcatcaaggtggccaagctcgccgaggtccgcgggggtctcgtg
ggcggtctgatcgtgggcgagaacgacgaggtgctcgtggtcatggagagcggcaaggtg
gtgcgctccaccgtgagcgaggtgccggcccgcggccgcgacaccatgggcgtgatcttc
gccaagccggggcccaacgacaccatcgtgggcgtggcccgcaacgccgagcgggagatc
gagaaggaagtggccgaggaggacgccgcggacgccaccgggccgggcggcgtcgtcgtg
gccgagacggacgtggcggcggacgggtccgtgcccgaggccgaggagcaggacggccct
gcgtccgatgcgcaaaacgatgcagtagcgttggaggacaacgacaacggaggtgacgca
tga
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