Kangiella sediminilitoris: KS2013_118
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Entry
KS2013_118 CDS
T04467
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ksd
Kangiella sediminilitoris
Pathway
ksd03420
Nucleotide excision repair
ksd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ksd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KS2013_118
03430 Mismatch repair
KS2013_118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ksd03400
]
KS2013_118
Enzymes [BR:
ksd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KS2013_118
DNA repair and recombination proteins [BR:
ksd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KS2013_118
MMR (mismatch excision repair)
Other MMR factors
KS2013_118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AOE48848
UniProt:
A0A1B3B7T6
LinkDB
All DBs
Position
109116..111290
Genome browser
AA seq
724 aa
AA seq
DB search
MDATSIIESLNDAQKEAVTAPNKALLVLAGAGSGKTRVLVHRIAWLVKVEQVSPHSILAV
TFTNKAAKEMLGRVEDMLAMPARGMWIGTFHSIAHRLLRAHYRDAGLPEGFQILDAQDQL
RVIKRVMKELNLDDNEWPPKQAQWFINAKKDDGLRPGDIHHHGDFFVSTMLKVYYAYEEA
CKTAGLVDFNELLLRAYELWAKNPHILKHYQERFQHILVDEFQDTNAIQYAWIRLLCNDK
NRITIVGDDDQSIYGWRGAKIENIQQFENDFPDCKISRLEQNYRSTATILKAANAVIAYN
SERMGKSLWTDGNEGEPITIYAAFNEQEEARFIAARIEDWVQQGNNHSEIAVLYRSNAQS
RILEDAMLNRNIPYRIYGGLRFFERAEIKDTLAYLRLMTNRDDDASFERVVNTPARGLGE
KSVDLVRAQARSDETSLWKAANKMVVEQLLPPRARTAMATFLHLINELDSSTAELDLWEQ
TEVVIEHSGLMDKVSKEKGEKAQARKENLQELVNATREFDPDEVIPEETPDMTPLTAFIA
HASLEAGDTQAEEYQDAVQMMTLHSAKGLEFPLVFIAGMEEKLFPHQMSLDEPGGLEEER
RLAYVGITRAMKQLYLTYAEKRRMWGRETYPTVSRFINEIPSELMTEVRLNTQVQRPVFQ
KESPIRKKGPDGFHLGQLVSHPKFGKGIIINYEGDGPQASVQVNFEKEGLKKLMLAYAKL
EPAS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgccacaagcataatcgaatcattaaacgatgcacagaaagaagcggtaactgcg
ccaaataaggcgctcctagtgctggccggtgccggttcgggcaagactcgagtactggtc
catcgcatcgcctggttagtaaaggtggagcaagtttcacctcactcgatcttagccgtg
acttttactaataaagcggcgaaagaaatgctgggacgggtagaagatatgctggctatg
cccgcgcgtggaatgtggataggtaccttccatagtatcgcgcacaggttacttcgtgct
cattacagggacgctggtttaccggaaggttttcagattctggatgcgcaggaccagcta
cgcgttatcaagcgggtaatgaaagaattaaatctagatgataacgagtggccgccaaag
caggcccagtggtttatcaatgcaaaaaaagacgatggacttcgccccggcgacattcat
catcatggtgacttcttcgtcagtaccatgttaaaggtttactatgcctacgaagaagct
tgtaaaactgccggccttgtagactttaatgagctgctgctcagagcttacgagctttgg
gccaagaatccacatatattgaaacactatcaggaaagatttcagcatattctggtggat
gagtttcaggatactaacgccatccaatatgcctggatcagattattatgtaacgacaag
aaccggatcaccatcgtgggtgatgacgaccagtcgatttacggctggcgtggtgccaag
attgaaaatatacagcaatttgaaaatgacttccccgattgcaaaatatccaggctggaa
caaaactatcgctcgacagcgaccattctaaaagcagccaatgcggtcattgcatataat
agtgagcgcatgggcaaaagcttgtggacggatggaaatgaaggggagcctattacaatc
tacgctgccttcaacgagcaggaagaagcgcgctttattgccgctagaatagaggactgg
gtacagcagggaaataatcacagcgaaattgcggtcctttatcgtagcaatgctcagtcg
cggattctcgaggacgccatgctcaacaggaacattccgtaccgtatttatggtggactg
cgattcttcgagcgagccgagattaaggatacactggcctatttaaggctaatgacaaat
cgtgacgatgacgcttcatttgaacgagtagtgaatacaccagcccgtggcttaggcgaa
aagtcggtcgatctggttagagcacaggctcgcagcgatgagacttcattatggaaggca
gccaataagatggtagtggagcagttattgccgccgagggcacgtactgccatggcaacg
ttcttacatctcattaatgagttggactcaagcacagcagagctggatttgtgggagcag
acagaggttgtgatcgagcactctggcctaatggataaagtaagtaaggagaaaggggag
aaagctcaggcccgtaaagaaaacttgcaggagctggttaatgctacccgtgagtttgat
ccggatgaagtgattccggaagagactcccgatatgacgccattaacagcattcattgct
catgcctctctggaagcaggagacacgcaggccgaggaatatcaggatgcggtacaaatg
atgacgctgcattcggctaagggtttggagttcccactggtctttattgctggtatggaa
gagaagcttttcccgcaccagatgtcgctggacgaaccgggtggacttgaagaagagcgt
cgcctggcctatgtcggaattacaagggccatgaagcagttgtatctcacttacgccgag
aagcgccgtatgtgggggcgtgagacatatccgaccgtgtcacggttcataaacgaaatt
ccttcggaactgatgaccgaagtccgcctgaatacacaggttcagcgtccggtattccag
aaagagtcaccaataagaaaaaaaggccctgatggtttccatctggggcagctggtcagc
catcccaagtttggcaaagggattattattaactatgagggtgacggtccacaggcttcg
gtacaggtcaattttgaaaaagaagggttaaaaaagcttatgttggcctacgctaaattg
gagccggcatcatga
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