KEGG   Lupinus angustifolius (narrow-leaved blue lupine): 109363305Help
Entry
109363305         CDS       T04664                                 

Definition
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lang  Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03030  DNA replication
lang03410  Base excision repair
lang03420  Nucleotide excision repair
lang03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lang00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    109363305
   03410 Base excision repair
    109363305
   03420 Nucleotide excision repair
    109363305
   03430 Mismatch repair
    109363305
Enzymes [BR:lang01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109363305
    6.5.1.6  DNA ligase (ATP or NAD+)
     109363305
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     109363305
DNA replication proteins [BR:lang03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    109363305
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     109363305
DNA repair and recombination proteins [BR:lang03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109363305
   NER (nucleotide excision repair)
    Other NER factors
     109363305
   MMR (mismatch exicision repair)
    Other MMR factors
     109363305
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 109363305
NCBI-ProteinID: XP_019465069
LinkDB All DBs
Position
LG13
AA seq 730 aa AA seqDB search
MSKPPSAFDALMSAARAAAKKKPPHSTTSSPKKRKSPPPPTPAPASTLNPSSNPKTLDSQ
DSVKPEPPPKKLRNVSNSSSLEKNAELKKLAPLLKKKPSEFKPSSVATWEKGDPVPFLFL
SLAFDMISKESGRIVITDIVCNLLRTVIYTTPEDLIPVVYLSANRIAPAHEGLELGIGDA
SIIKGLAEACGRTEAQIKKQYKEKGDLGIVAQASRSSQSMMRKPDPLTIRKVFKTFHLIA
KESGKDSQEKKKNHIKALLVAATDCEPQYLIRLLQAKLRIGYAEQTLLAALGQAAVYTEE
HSTAPPEVQSPFEEASKIVKHVYSVLPDYDKIASALLAHGVWELPKTCTFTPGVPVGPML
SKATKGVSEVLNKFXDVEFTCEYKYDGERAQIHYMENGAVEVYSRNAEQNTGKFPDVVAA
VSRLKKSNVSSFVLDCELVAYDRAKKKILPFQVLSTRARKNVTMNDIKVDVCIFAFDLLY
LNGKALLQENLKIRREHLYASFEEESGFFQFATAIISNDVEEVQKFLDQAVDASCEGLII
KTLNDDATYEPSKRSLNWLKLKKDYMENIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD
NNNEEFQSICKIGTGFSEEMLEERSTSLRSKVIPKPKAYYRYAETINPDVWFETSEVWEV
KAADLTISPVYRAAVGIVDSNKGISLRFPRLIRVRPDKAPEEASSSEQVADMYNAQKHNH
VNNQDEDEDD
NT seq 2193 nt NT seq  +upstreamnt  +downstreamnt
atgtccaaaccaccctccgccttcgacgcccttatgtccgccgcacgcgccgccgcaaaa
aagaaacctcctcactcaacaacctcttcccctaagaaacgaaaatctccacctccccca
acccccgctcccgcttcaaccttgaaccctagcagcaaccctaaaacccttgattctcag
gactccgtgaaacctgaaccgccaccgaagaagcttcgcaatgtgtctaattcttcttcg
ctggagaagaacgctgaattgaagaaattagctccactgctgaagaagaaaccctccgag
ttcaaacctagctccgtagctacatgggagaagggtgatcccgttccgtttctgttcctt
tctctagcgtttgatatgatttcaaaagaatccggaaggattgttattactgatatagtg
tgcaatcttttgaggactgtgatatatactacacctgaggatttgatccctgttgtttat
ctttccgcgaatcggattgcgccggcgcatgaagggttagaattgggaattggagatgct
tccattatcaaggggctcgctgaggcatgtggaaggactgaagcacagattaagaagcag
tataaggaaaaaggtgatttaggaattgttgcccaagcaagccggtcttcccaatctatg
atgcggaaacctgatccattgacaattaggaaggttttcaaaaccttccatcttattgcc
aaggaatctggaaaagacagtcaagagaagaaaaagaatcatatcaaagcactccttgtt
gcagcaactgattgtgaacctcaatatctaatccgcttgttacaggctaagttgcgaatt
gggtatgctgagcaaactctcctagctgcattaggccaagctgcagtatacactgaagaa
cattctacagcacctcctgaagttcagtctcctttcgaagaggcttcaaagattgttaaa
cacgtttattctgttcttccggactatgacaaaatagcatctgcattgcttgcacatggt
gtatgggagcttccaaagacatgtacgtttactcctggcgttccagttggaccaatgctg
tcaaaagcaaccaaaggtgtatctgaagttctaaataaattttaggatgtggagtttacc
tgtgaatataaatatgatggagagcgtgcccagatacattacatggaaaatggcgccgtt
gaggtttacagtagaaatgcagaacagaacactgggaagtttcctgatgttgttgctgca
gtttcaaggttaaagaaatcaaatgtatcatcatttgttcttgattgtgagcttgttgca
tatgatcgtgctaagaagaaaatccttcctttccaggttcttagtacccgggctcgcaaa
aatgtcactatgaacgatataaaggttgatgtttgcatatttgcttttgatttgttatat
cttaatgggaaagcacttcttcaggaaaacctgaaaatccgtagagagcatctctatgcc
tcttttgaggaagaatctggattttttcagtttgcaacagcaataatatcaaatgatgtt
gaggaagtacagaaatttcttgaccaagctgttgatgcaagttgtgagggattaattatt
aaaacattaaatgatgatgctacatatgaaccttccaagcggtcactcaactggctaaaa
ctgaagaaagattatatggagaatataggggactcactagatttggtacctattgctgct
ttccatggtcgtgggaaacgtacaggagtctatggtgcctttctacttgcttgctatgac
aacaacaatgaagaattccaaagtatttgtaaaataggaacgggattctctgaagaaatg
ctcgaagaaagatctactagtcttcgttctaaagtgattcccaagccaaaggcatactat
agatatgcagagacaatcaaccctgatgtctggtttgaaaccagtgaggtgtgggaggtg
aaagctgcagacttgaccattagccctgtttaccgtgctgcagtgggcatagtagattca
aataagggcatttcacttcggttcccacgtttaattcgtgtgcgacctgacaaagctccg
gaagaggcctcatcatctgagcaggttgccgatatgtataatgcccaaaaacataatcat
gtgaacaaccaagatgaggatgaagatgattga

DBGET integrated database retrieval system