Candidatus Liberibacter africanus: G293_04155
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Entry
G293_04155 CDS
T03953
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lau
Candidatus Liberibacter africanus
Pathway
lau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G293_04155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lau03021
]
G293_04155
03400 DNA repair and recombination proteins [BR:
lau03400
]
G293_04155
Enzymes [BR:
lau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G293_04155
Transcription machinery [BR:
lau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G293_04155
DNA repair and recombination proteins [BR:
lau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G293_04155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AKK20455
UniProt:
A0A0G3I5E0
LinkDB
All DBs
Position
917046..921242
Genome browser
AA seq
1398 aa
AA seq
DB search
MQQEVMRFLNPWTDDREFDSVRISIASPEKIISLSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLSSVRRDRMAHIQLACPVAHPWFLKS
LPSRISMLLDMTLKDVERVLYFESYVVVDPGLSSLEKYQILTEEEYVEAVNQFGHDQFTA
MMGADAIRELLIGLDLQNLAITLRSQLSKSSSIFRRKKIIKRLKIVDNFIISGNKPEWMV
MTVIPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPDIIVRNEKRM
LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGRSVIVAG
PELLLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKEKPEVWDVLAEVVHQ
HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYVVISPEAQL
EARVLMLSTNNLLHPASGVPVVVPSQDMVLGLYYLSIVHEGEPGEGMIFADISEVYHALE
HKVVTLHSKIRGRYKNIDEKGNWTSTVYDTTPGRMIIGEILPRHHNISFDLCNQEMIKKN
ISSMVDAIYRHCGQKSTVSFCDDLMRLGFRYACSSGISFGKDDIIVPESKESIIAKADEM
VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMARIKQVEFDPETGRQKQMNSIF
MMSHSGARSSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKDGLYGFEFFQSCVGGRKGL
LDVVMRTASSGYLSRRLVDVAQNCIVNQVDCKTKKGLTITHIVDSGQVVYSLGNRILGRT
TLDDIINPSTNECIISAGNLILESHVNEIEKCGIRSVKIRSVLTCEASKGVCSLCYGRDL
ARGTLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFLESSCEGTVKIKNRS
VCRNSTNDLISMGRNTTLQILDTSGQEQSSHRIMYGAKLFVDDGDEIKCGQRISEWDPHT
FPMITEVSGTVEFEDLVDGISVIESIGESTGIAKRKVIDWRFTSRGQNLKPAIVVKDENG
AVLKFARGTDARFFLPVDAILSVSPGQKVSTGDVLSRWPISSAKTKDITSGLPRVAELFE
ARRPKNHAILAEISGTIRIKRNYKNKSRVLIEPFEEGIDPVEYFIPKNKHFYLQDGDHVE
KGDYILDGNPVPHDILRIKGIEALASYLINEVQEVYLLEGVTINDKHLETVLRQMLQKVE
ITDPVDTEYILGDVVDRIEIEELNKSRVQEGKKEISFSLVLQGITRASLDTNSFMSAASF
QETTKVLTEAAIAGKVDMLEGLKENVIVGRLIPAGTGAILHEKRRIAMNRDQMILKERSN
SLSDQDCNNTTVQGMISE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagaggttatgagatttttaaatccttggacagatgatagagaatttgattcc
gtcaggatttcaattgcctctccagaaaagattatatcattgtcttatggtgagataaaa
aagcctgagacaattaattatcgtacttttaaaccggaaagagacggtttattttgcgcg
cgtatttttggtcctattaaagactacgaatgtatatgtggtaagtataagcgcatgaag
tataagggaattatttgtgaaaagtgcggtgtggaggtgacgttatcttctgttcgccgg
gatcgcatggctcatattcagttggcttgtcctgttgctcatccgtggtttcttaaatct
ttgccatctcgtatatctatgttacttgatatgactttaaaagatgtagagcgtgtttta
tattttgagagttacgttgttgttgatcctggtctatcttcattagaaaaatatcaaatt
ttgacagaagaagaatatgtagaagcagtaaatcaatttgggcacgatcaatttactgct
atgatgggcgcagatgcaatacgcgagttattaattggattggatttacagaatttggct
attactttgcgtagtcaactaagtaaatcttcttctatttttagaagaaaaaagataata
aaacgccttaaaattgtggataattttatcatttcagggaataaacctgaatggatggtt
atgaccgttattcctgttcttcctcctgatttaaggccgttagtagctcttgattttgga
agatttgcagcttctgatttaaatgatttatatcgtcgggttattggtagaaataatcga
ttgatgagattaaaaagtttgcatgctccagacattattgtgcgcaatgagaagagaatg
ttgcaagaatcggttgatgctttgtttgataatgggcgccataagcgtgtggtaaccggt
gcaaataggcgtcctttgaagtcgttgtctgatatgttgaaaggtaaacaggggcgattt
agaacaaatcttcttggaaagagagtcgattattctggtcgtagtgttattgtggcaggt
ccagagttacttttgcatcagtgcggacttcctaagctaatggcacttgaattattcaaa
cctttcttatatgcacagttagaaaaaaaaggatatgtttctactgttaaacaagctaaa
aagtttgttgaaaaagagaagcctgaagtttgggatgtgcttgctgaggttgttcaccaa
catgtcgtattgcttaatcgtgctccgagtttgcatcgtttaagtatgcaggcttttgaa
ccaaagattataagtggaaaagctattcagcttcatcctttggtatgtgcagggtataat
gctgactttgatggagatcagatggcagtttatgtcgttatttctcctgaagcgcagttg
gaagcacgtgtattgatgttatctacaaataatcttttgcatccagcaagtggagttccc
gttgtagttccttcgcaagatatggttttaggtctttattatttgtctattgttcatgaa
ggagagccaggtgaaggaatgatttttgctgatatcagcgaggtatatcatgcacttgag
cataaagtagtgacgttgcattcaaaaattcgtggaagatataaaaatattgatgaaaaa
ggcaattggacttcaacagtatatgatacaactccagggcgtatgattataggtgaaata
ttacctcgccatcataatatttcgtttgatctttgcaatcaggaaatgattaagaaaaac
atttcgtccatggtagatgcgatttatcgtcattgtggacagaaaagtacggtttctttc
tgtgatgaccttatgcgtttaggatttcgttatgcgtgttcttctggaatttcttttggt
aaagatgatataattgttcctgagtcaaaggaaagtattattgccaaagccgatgagatg
gttaaagaatatgaaaatcaatataatgatggattgattacacgtggtgaaaaatataat
aaagtcgttgatttatggggtaagacaactgataaagtgaccgaagaaatgatggcgcgt
attaaacaagttgaatttgatccagaaactggtcgtcaaaagcagatgaattctatattt
atgatgtctcattctggtgcccgtagttctatacatcagatgcgtcagcttggtggaatg
agaggtttgatagcgaagccatcaggggaaattattgaatctcctattcgttctcacttt
aaagacggtctttatggatttgagttcttccaatcttgtgtcggtggtcgtaaaggattg
cttgatgttgttatgagaactgctagttctggttacttaagtcgtagacttgtagatgtt
gctcagaattgcattgtcaatcaagttgattgtaagacgaaaaaaggtttgactattacg
catatagtagattcaggacaagtagtttattctcttgggaatagaattttaggacgtact
actcttgatgatattatcaatccatctacaaatgaatgcattataagtgccggtaattta
atacttgaatcacatgttaatgaaattgagaaatgtggtattcgttctgtgaagatccgt
tctgtgttaacttgtgaagctagtaaaggagtatgttctctttgttatggtcgggatctc
gctcgaggaactcttgttaacgtaggtgaagctgtcggtgtgattgccgctcagtcaata
ggtgagcctggaacacagttgacaatgcgtactttccatcttggaggtgcggtgacagtt
atggatcgatcttttcttgagtcctcttgtgaggggacggtcaagatcaaaaatcgtagt
gtttgtcgtaattctacaaatgaccttatttcaatgggtcgtaatacaacacttcaaatt
ttggatacatctgggcaagagcaatcttcacatcgtattatgtatggtgctaaactattt
gttgatgatggtgatgaaataaaatgtgggcagcgtatttctgaatgggatccccatact
ttcccaatgataaccgaagtttctggaactgtagaatttgaggatcttgtggatggtatt
tctgtgatagaaagcattggtgaatctacaggtattgctaaaagaaaagttattgattgg
cgatttactagtcgaggtcaaaatttaaaaccagctatcgttgttaaagatgaaaatggt
gctgtgttgaaatttgctcgtggaacagatgctcgattctttttgccggtagatgcgatt
ctttctgtctctcctggacaaaaagtttctacaggggatgttttgtctcgttggccaata
tctagtgctaagacgaaagatatcacgagtggattgccacgagttgctgagctttttgaa
gcacgtcgtcctaaaaatcatgctatattagcagaaattagcgggactattagaataaaa
agaaattataagaacaaatctcgcgtattgattgaaccttttgaagaaggcatcgatcct
gtcgaatactttatcccaaaaaataaacatttttatttacaggatggggatcatgttgaa
aaaggtgattatattcttgatgggaatcctgttccgcatgatattttaagaataaagggc
atagaagcattggcctcttatctcattaatgaggttcaagaagtttatcttctagaaggt
gtgacgatcaatgataagcatctagaaactgtgttacgtcaaatgttgcagaaagttgaa
attactgatccagttgatactgaatatatattaggcgatgttgttgatcgcatcgaaata
gaagagttgaataaatctcgtgtacaagaagggaagaaagagatttctttttctcttgta
cttcaaggtattacaagggcttctctagatactaactcatttatgtcagctgcttccttt
caggaaacaacaaaagttcttacagaagcagcaattgctggtaaagttgatatgttagaa
ggtcttaaagaaaatgttattgtaggtcgtttgattcctgcaggaacaggggctattttg
cacgaaaaacgtcgtattgctatgaatagagatcaaatgattcttaaagaaagatctaat
tctttatcggatcaagattgtaacaacacaaccgttcaagggatgatatcagaatag
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integrated database retrieval system
