Loxodonta africana (African savanna elephant): 100664398
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Entry
100664398 CDS
T04351
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04151
PI3K-Akt signaling pathway
lav04510
Focal adhesion
lav04512
ECM-receptor interaction
lav04926
Relaxin signaling pathway
lav04933
AGE-RAGE signaling pathway in diabetic complications
lav04974
Protein digestion and absorption
lav05146
Amoebiasis
lav05165
Human papillomavirus infection
lav05200
Pathways in cancer
lav05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100664398 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100664398 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100664398 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100664398 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
100664398 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100664398 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
100664398 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100664398 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
100664398 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100664398 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lav04147
]
100664398 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
lav00536
]
100664398 (COL4A4)
Exosome [BR:
lav04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100664398 (COL4A4)
Glycosaminoglycan binding proteins [BR:
lav00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100664398 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100664398
NCBI-ProteinID:
XP_010595977
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MALIRCPFGWTKPFTAVPWSLTLVLFSVQHACGSGKKYSSPCGGRDCSVCQCFPEKGSRG
QPGLLGPQGPIGYLGPPGPIGIPGEKGLRGDNGLPGAAGEKGEKGPTGVPGFPGLDGIPG
HPGPPGSRGKPGLNGYNGSRGDPGLPGERGAPGPGGPPGLPGENGEKGNSVFVLGGIKGI
QGNRGDPGPPGFPGSRGASGPAGPVGFPGEPGLTGPPGHPGSPGLKGNPGVGVKGQKGDP
GEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGMPGVIGPPGLSGLKGKPGIGAKGEKGIVG
FPGPRGEPGSYGSPGFPGLKGEPGLIGDPGLFGFLGSKGDPGDRGHPGPPGVLVTPPVPL
KGPPGDPGFPGHYGEMGAVGPPGPPGVSGGPGEARSGVMGPPGPRGFPGHPGLPGTAGIP
GRADSAPGKPGNPGPPGLPGVPGLQGPPGSDVIYCSVGNPGPRGIKGKAGPPGRRGSKGE
KGNEGLCACDPGPMGPPGPPGLPGRQGFRGDLGLPGWLGEKGDPGPPGVEGSPGPPGKPG
ASGPRGSKGEKGDMVVLRIKGHKGERGPDGPPGYPGQQGQDGEDGHAGGRGDPGPPGDHE
DAIPGGKGFPGPSGPPGRAGSAGPPGLGFPGPPGERGRPGAPGCPGMRGPDGLRGSKGDT
IPCNITYPGRPGPPGFDGPPGPKGFPGSQGAPGPRCFDGQKGQRGKPGISEIPGPPGFRG
DMGDPGFRGETGSSPVGPPGFPSSPGVDGRKGIPGDPAYGYPGPPGKRGLSGVPGVKGPR
GDLGHPGPAGSAGTPGIPGLKGPKGREGSAGFPGIPGPPGHSCERGAPGMLGQPGLPGAP
GSPGAPGWKGQRGDQGPPGPAGMKGLPGAPGQPGADGLPGPPGISGLFGDDGLPGLPGPH
GPQGLPGVPGFPGERGKPGLEGRPGRKGEHGEKGLPGLLGDRGARGAKGERGPPGDEGEI
AIISIKGKTGEPGPPGDAGVSGEKGDKGSPGMQGRKGEPGTHGSPGFHSGEPGRNGQQGL
PGPPGPPGLPGLRGIIGFPGFPGDQGDPGSPGPTGLTGSDGARGPKGNKGDPPSQAGPPG
PKGDPGSLGYPGHFGVPGERGLPGDQGPRGPPGRPGLPGSSGPPGCPGDRGVPGLRGHPG
ETGDPGPRGLVGHPGTPGPPGLKGSSGSPGLNGLHGLKGQKGSKGASGLHEMGPPGPVGI
PGLKGEKGDPGSLGISPPGLFGEKGSSGPPGRPGPPGPAGAPGRAAKGDIPDPGLPGDQG
PPGPDGPRGALGPPGAPGNVELLRGEPGDCGLPGPPGPRGPPGPPGCKGYPGCDGSDGQR
GPMGFPGPQGPHGFPGPPGEKGLPGPPGQQGPPGPPGSRGEPGPPADAEACPQIPGLPGV
PGPRGPEGAMGIPGTRGPPGPECKGEPGLDGRRGEPGIPGTPGPSGRKGDTGEAGRPGAP
GPPGPVGDPGPKGFGLGYLSGFLLVLHSQTDQEPACPVGMPKLWTGYSLLYLEGQEKAHN
QDLGLAGSCLPMFSTLPFAYCNTHQVCHYAQRNDKSYWLASAAPLPMMPLSEEEVRPYIS
RCTVCEAPAQAVAVHSQDQSIPQCPRSWRSLWIGYSFLMHTGAGSQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVKPDLQFSSAPSPDTLKESQAQRQKISRCQ
VCMKYS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaataaggtgcccttttggatggaccaagcccttcaccgcggttccctggtca
ctgacacttgttctcttttctgtacaacatgcatgtgggagtggaaagaaatatagcagt
ccttgtggaggaagagattgttccgtttgccagtgctttcctgaaaaaggatctcggggt
cagccaggattactggggccacagggtccaattggttacctgggacctccaggacccatt
gggattcccggagagaaagggctgagaggtgacaatggccttcctggagcagcaggggag
aagggggagaagggcccaactggtgttcctggatttccaggtttggatggtatacctgga
cacccaggtcctcctggatccagaggcaaacctggcctgaatggctacaatggctcaaga
ggtgatccagggcttccaggagaaagaggagctcctggcccaggaggacccccaggtctt
cctggagaaaatggagaaaaaggaaattcagtattcgttttaggtggcattaaaggtatt
cagggaaacagaggggacccaggacctcccggcttcccaggatctaggggagcgagtgga
cccgcaggcccagtgggcttcccaggagagccggggttaacaggacctcctggccatcct
gggagtccaggtttgaagggtaatcctggcgtgggagttaaggggcaaaagggagacccg
ggtgaggttggccagcaaggttctccaggaccaactctgttggtagagccacctgatttc
tgtctctataaaggagaaaagggtataaaagggatgcctggagttattgggccaccggga
ctttcgggactcaagggaaaacctggcattggggcaaaaggagaaaaaggtattgttggg
ttcccaggacctcggggtgaacctggttcctatggatctccaggttttccaggattaaag
ggggaaccaggactgattggcgatcctgggctgtttggatttcttggctcaaagggggat
cctggagaccgtggacacccaggaccaccaggtgttttggtaactccacctgttccactt
aaaggccctccaggggatccagggttccctggccactatggagaaatgggggcagttgga
ccacctggtcccccaggtgtctcaggtggaccaggggaagcccggtcaggcgtgatggga
ccccctgggccccgagggtttcctggtcatccagggcttccggggacagccggcattcct
ggaagagctgactctgctccaggaaaaccagggaacccaggaccacctggcttgcccgga
gtgccagggctgcagggacccccaggatcagatgttatatattgtagtgttggaaacccc
ggaccacgaggaataaaaggcaaagcaggtcctccaggaagaagaggctcaaaaggagaa
aaaggaaacgaagggctctgtgcctgcgaccctggtcccatggggccccctggtccccca
ggacttcctgggcggcaaggttttaggggagacttggggctccctgggtggcttggagaa
aaaggtgacccaggtcctcctggtgttgaaggatccccggggccaccaggaaaacctggt
gcctcaggaccacgtggcagcaaaggagaaaagggcgacatggttgtcttgagaatcaaa
ggacacaaaggagaaagaggtcctgatgggcccccgggatacccagggcaacaggggcag
gatggtgaggatggacatgctggaggaagaggagacccaggacccccaggggatcacgaa
gacgcaatcccaggtggaaaagggtttcctggaccatctgggcccccaggcagagcagga
tcagcggggcctccaggtctgggatttcctggcccaccaggagagagagggagaccagga
gctcccggctgccccggcatgagaggccctgatggcttgaggggttccaaaggtgataca
attccttgtaacataacctacccagggaggccaggccctccaggttttgatggacctcca
ggtccaaaaggatttccaggttcacagggtgctcctgggccgaggtgttttgatggacaa
aaaggccaacgtggcaaaccgggaatatccgaaataccaggtccacctggttttcgtggt
gacatgggagacccaggttttagaggtgaaacggggtcctcccctgttgggcctccaggc
tttcctagttcacctggtgtagatggtcggaaaggaatcccaggtgaccctgcttatggc
tacccaggacctccaggaaagaggggtctttcaggagtgccaggcgtgaaaggacccaga
ggtgatctgggacatccggggcctgcagggtcagctggcactccaggaattccaggactc
aagggtcccaaaggcagagagggaagtgctgggtttccaggtatcccaggcccacctggc
cattcctgtgaaagaggcgctccggggatgctagggcagccaggactccctggggctcca
ggtagtccaggtgccccaggttggaaaggacagcgaggggatcaagggccccctggacca
gctggaatgaagggtcttcccggagccccaggacagccaggggcagatggactccctggg
ccgccaggaatctcaggactctttggggatgatggactacctggtcttccaggccctcat
ggacctcagggtctgcctggtgtcccaggttttccgggagagagaggaaagcccggccta
gagggacgacctggcagaaagggagaacatggagagaaaggtttgcctggtcttttggga
gaccggggagcaagaggtgccaaaggagagagaggacctccaggagatgaaggagagata
gctataatttccataaaagggaagaccggagaacctggaccccctggagatgctggagtc
tcaggagaaaaaggtgataaaggaagtccaggcatgcaagggagaaaaggagagccagga
acacacgggtcacctggatttcacagtggggagcctggtagaaatggacagcaggggctt
cctggaccaccaggacctccaggtttacctggcctaagaggaatcattggttttccggga
tttccaggtgaccagggtgatccaggttctccaggccccactggacttacaggaagtgat
ggagctagaggacctaaaggaaacaaaggtgaccctccaagtcaagctggtccacctggt
ccaaagggtgatccgggtagccttggatatccagggcatttcggagtccccggagagcgg
ggcttgcctggtgatcaagggcccagaggaccacctggaaggccaggactgcctggctcc
tctggaccaccagggtgcccaggagatcgaggggtgcctgggctgaggggacatccagga
gaaacaggagaccctggaccaagaggcctcgtggggcatccagggacaccaggtcctcca
ggactgaaaggttcctcggggtctcctggtcttaacggcttgcatggtttaaagggccag
aaaggaagcaaaggtgcttcaggtttgcatgaaatgggcccaccaggtccagtgggaata
cctgggctgaaaggggagaaaggagaccccgggagtctaggaatttctcctccaggcctt
tttggagaaaaaggttcttcaggtcccccagggagaccaggaccacctggtcctgccggt
gccccaggaagagccgctaagggtgacattcctgacccaggtctacctggagatcagggg
cctcccggtcccgatggtccaagaggtgcactggggcctccaggtgcccctgggaatgtt
gaactcctgagaggggagcccggcgactgcggcctgccagggccaccaggtccccgaggc
cctccaggccctccagggtgcaaaggttatccaggatgtgatggaagtgacggccagaga
ggaccaatgggattcccagggccacagggaccccatggatttcctgggccacctggagaa
aagggtttacctggacctccaggtcaacaagggcctcctggtcctccaggttccaggggt
gaacctgggccacctgcagatgcagaggcctgcccccaaatcccagggcttcctggggtg
ccaggcccaagaggaccggaaggagccatggggatccctggaacgagaggtcccccagga
ccagagtgcaaaggagagcctgggttggatggcagaaggggcgagcctggcattcctggg
acacctgggccttcgggacgcaagggtgacacaggagaagctggccgccctggagcacca
ggccctcctggccctgttggggatcctgggcccaaagggttcggacttggatatctcagt
ggcttcctcctggttctccacagtcagacggatcaagaacccgcctgccccgtgggcatg
cccaagctctggacggggtatagtctgttatacctggagggacaagagaaagctcacaac
caggaccttggtctggcagggtcttgccttcccatgtttagcacactgccctttgcctac
tgcaacacccaccaagtgtgccactatgcccagagaaatgacaaatcctactggctggcc
agcgctgcccccctgcccatgatgccgctctccgaagaggaagtccgcccgtacatcagc
cgctgcactgtgtgtgaggccccagcccaggcggtggcggtgcacagccaggaccagtcc
ataccccagtgtccacggtcctggaggagcctctggattggatattcattcttgatgcac
acaggagctgggtcccaaggcggaggacaggccctcatgtcaccgggcagctgtctggaa
gatttcagggcggcgccattcctcgaatgccaaggccggcaaggaacgtgccactttttt
gccaatgagtatagcttctggctgacaacagtgaaaccagacttgcaattctcctctgca
ccctcaccagacaccttaaaagaaagccaggcccagcgccagaagatcagcagatgccaa
gtctgcatgaagtacagctag
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