Lactobacillus amylovorus GRL1118: LAB52_01995
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Entry
LAB52_01995 CDS
T01954
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
lay
Lactobacillus amylovorus GRL1118
Pathway
lay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LAB52_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_01995
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LAB52_01995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DAP3
AAA_23
AAA_29
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AEA31382
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Position
378044..380644
Genome browser
AA seq
866 aa
AA seq
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MAKASMTPMMEQYYEIKKQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKTKN
PIPMAGVPHLAVDTYVNTLVEKGYKVALCEQLEDPKKAKGMVKRGIIQLVTPGTMMNEGP
NDAKDSNYLTSVVTTKSGFGLAYSDLSTGEIYATHLKSFEAVSNELLSLRTREVVYNGPL
TEQNKDFMHKANITVSAPTPIEGEHAEISYVEQNLTNKAEKEATRQLVGYLLSTQKRSLA
HLQIAKSYEVNQYLQMSHTVQNNLELVASAKTGKKMGSLFWVLDKTHTAMGGRLLKQWLA
RPLLNVDEINHREEMVQALLDGYFTRENAIDALKGVYDLERLTGRIAFGNVNARELLQLS
RSLQAVPVILDALNQSDSQVLEDFAQKIDPLKGVAEMISTTLVKDPPILTTEGGLIREGV
DKQLDRYKDAMNNGKKWLAQMEADERQKTGIDNLKVGYNKVFGYYIQVSNGNKSKVPLDR
YTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLFVKLREEVKKYIPALQKLGGQ
LAALDVYCGFATVAEQNNYCRPHFHTDNQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSA
TNIFLITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSADLPIFDQIFTRIGAADDLISG
QSTFMVEMSEANDALQYATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFA
THYHELTALDETLDHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVL
REATKLLKRLEAQGSELAPVSQQLDLFAEPVDSSDEEEQIQNDKPAMTDAEQDVLDDISN
LYLADKTPLQIMQMVADWQKDLKDDN
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaagtatgactccaatgatggagcaatattacgaaattaaaaagcaatat
cctgatgcctttcttttttatcgcgtcggagatttctatgaacttttcgaagacgatgcg
gttaagggcgctcagattcttgaattaactttaacacaccgttcaaataaaactaagaat
ccaattccgatggctggtgtacctcatttggccgttgatacttatgtaaatactttggtt
gaaaagggatataaggttgcactttgcgaacagctcgaagatcctaaaaaagctaagggc
atggtaaagcgtggcattattcaattggtaactccaggtaccatgatgaatgaaggtccc
aatgatgctaaggattctaactatttaacttcagtagtgactactaagagtggctttggc
ttagcctacagtgatttatcaactggtgaaatttatgcgacacatttgaagagcttcgaa
gctgtttctaatgaacttttatcattaagaacacgcgaagttgtttacaatggtcctttg
actgaacaaaataaggactttatgcataaggctaatatcaccgtttccgcgcctacgcca
attgaaggcgaacatgccgagatttcttatgttgaacaaaatttaaccaataaggcagaa
aaagaagctacgcgtcaactggtaggctatcttttatctacccaaaagagaagcttagcc
cacttgcaaattgctaagagctacgaagtaaaccaatacttacagatgtcgcatactgtt
caaaataatttggaattagttgcatctgctaaaactggtaaaaaaatgggctcgcttttc
tgggttcttgataaaactcatacggcaatgggtgggcgtctgcttaagcaatggttagct
cgaccactgcttaatgtggatgagatcaaccaccgtgaagaaatggtgcaagctctgctt
gatggttacttcacacgtgaaaatgcgattgatgctttgaagggcgtttatgacctagag
cgtttaactggtcgaattgcctttggcaatgttaatgcacgtgaacttttgcaattatcc
cgctcacttcaagctgtgcctgtaattttggatgctttgaaccaatcagatagtcaagtg
ctagaagattttgcccaaaagattgatccattaaagggcgtagcagaaatgatttcaacg
actttggttaaggatccaccaattttgactacagaaggtggcttaattcgcgaaggcgtt
gataagcaactggaccgctacaaggatgccatgaataatggtaaaaagtggttagctcaa
atggaagctgacgaacgacaaaagaccggtattgataacttgaaagttggctataacaag
gtctttggctattacattcaagtatctaacggtaataagagcaaggtgccactggatcgc
tacacgcgtaaacagactttgaccaacgctgaacgttacattacgccagagttgaaggaa
cacgaaaacttaatcttggaggcgcaaactcgttcaactgacttggaatatgacttgttc
gttaaattacgtgaggaagttaagaagtatattcctgccttgcaaaaattgggtgggcaa
cttgcagccttagacgtttactgcggctttgcgaccgtagctgaacaaaataattactgc
agacctcacttccataccgataatcaggatatcgatgtggttaatggccgccacccagta
gttgaaaaagttatgactgccggttcctacatccctaacgatgtcaaaatggattcagct
actaacattttcttgattactggtcctaacatgtctggtaagagtacctacatgagacaa
atggctttaatcgcaatcatggcgcaagtgggctcctttgtcccagctgatagtgctgat
ttgccaatatttgatcaaatctttactcgaattggtgctgccgatgacctgatttctggt
caaagtaccttcatggttgaaatgagcgaagcaaacgatgctttgcaatatgcaactaaa
cgcagtttggttctctttgacgaaattggtcgtggtactgcaacttacgatggtatggct
ttagctggggcgatcgttaagtatctgcatgataaagtaggagctaaggcattatttgcg
acccactaccatgaattaactgcacttgatgagacactggatcatttaaagaacatccac
gttggtgcgactgaagaaaatggcaagctgatctttttgcacaagattttaccaggacca
gccgaccaaagttatggtattcacgttgcccaacttgctggtttaccacgtgccgtattg
cgtgaagcaaccaaattattaaaacgtcttgaagcacaaggcagtgaacttgctccagtt
agtcagcaattagacttattcgcagagcctgtggatagttcagatgaggaagagcaaata
caaaatgacaagccagctatgaccgatgcggaacaagatgtgcttgacgatatttctaat
ctttatttggccgataagacaccacttcaaattatgcaaatggtagcggattggcaaaaa
gacttgaaggatgataactaa
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