Lelliottia amnigena: A8A57_11710
Help
Entry
A8A57_11710 CDS
T04400
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
laz
Lelliottia amnigena
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
laz03016
]
A8A57_11710
Enzymes [BR:
laz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A8A57_11710
Transfer RNA biogenesis [BR:
laz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A8A57_11710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
ANG93035
LinkDB
All DBs
Position
2512431..2514365
Genome browser
AA seq
644 aa
AA seq
DB search
MLQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
TAVIHTEKDRESAEPEELIEPFLTRFVGRVQKKDDRLAIVPDHPLLKEAIPCRAERGVEH
DFKGGDWAVAQMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEASNGVAT
ELLDEGLERRDLTALSFVTIDSASTEDMDDALYVEESADGKLHLTVAIADPTAWIAEGSK
LDNSAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEIRPVLACRMTIAGDGTIEEDIEF
FAATIESKAKLVYDEVSDWLENTGSWTPPDEAIAEQIRLLHRVCLNRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEECMISANICAARILRDTLGFGIYNVHTGFD
PANTEALAALLKNHDVHVDPQEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSYAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIVKGETIARPQDEATVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGSVQIKGETVYKVTDVIDVTIAEVRMETRSVIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggataacccgctgctagcgcagcttaaacagcaactgcattctcagacgccg
cgtgcagaaggcgttgtcaaagccacggaaaaaggctttggcttccttgaagtcgatgca
caaaaaagctacttcatcccgcctccgcagatgaagaaagtcatgcacggcgatcgtgtc
acggcggttattcacactgaaaaagatcgtgaatctgctgagccagaagaactcattgaa
cctttcctgacccgcttcgtgggccgggtgcaaaaaaaagacgaccgcctggcgattgtg
ccggatcatcctctcttaaaagaggcgatcccctgccgcgctgaacgtggcgttgaacac
gattttaaaggaggtgactgggccgttgcacaaatgcgccgtcatcctctgaaaggcgat
cgcggtttttatgccgaactgacccagttcatcacctttggcgacgatcattttgttccg
tggtgggtaacgctcgcccggcataatctggaaaaagaagcatcaaacggcgtggcgaca
gagttgctggacgaagggcttgaacgtcgcgatctgacggcgttgagcttcgtcaccatt
gacagtgccagtacggaagatatggatgacgcgctctatgttgaagaaagcgccgacggt
aagctgcatctgacggtagcgatagccgatcctaccgcatggattgctgaaggaagcaag
ctggataattccgcgaaggtgcgtgctttcaccaactacctgcccggctttaacatcccg
atgctcccgcgcgagctttccgacgatctctgctcgctgcgtgccaatgaaattcgccct
gttcttgcctgccgaatgaccattgctggcgatggcaccatcgaagaggacattgaattc
ttcgcggccaccatcgaatcaaaagcaaaactggtttatgacgaggtttcagactggctg
gaaaataccggcagctggacgccgccagacgaagccattgctgagcagattcgtttgctg
catcgtgtctgtcttaaccgtagcgaatggcgtcaaactcacgcgctggtcttcaaagac
cgtcccgattaccgtttcgtgctgggtgagaaaggcgaagtgctggatatcgtcgccgaa
ccgcgtcgtatcgctaaccgcattgttgaagagtgcatgatttcggccaacatttgtgcg
gcacgcattctgcgcgacacgctcggctttggtatctacaacgtgcacaccggcttcgat
ccggccaacacggaagcactggcagcactgctgaaaaaccatgatgtgcatgtcgatcca
caagaagtgctgacgctggaaggcttctgtaaattgcgccgcgagctggatgcccaaccg
tccggtttcctggacagccgtattcgccgcttccagtcctatgcggaaatcagcaccgag
cctggcccacactttggactcggtcttgaagcgtacgcgacctggacctcaccgattcgt
aagtatggcgatatggttaaccatcgtctgctgaaagcgatcgttaagggcgaaaccatt
gcgcgtccacaggatgaggccaccgtgcaaatggcggagcgtcgtcgcctgaatcgcatg
gccgagcgtgacgtgggcgactggctgtatgcccgtttcctgaaagataaagccggcaca
gacacgcgctttgccgctgagattatcgatattagccgtggcgggatgcgtgtccggctg
gtggataacggtgccgtcgcctttatccctgccccgttcctgcatgccgtgcgtgatgaa
ctggtgtgtagccaggaaaacggctcggtgcagattaaaggcgaaactgtttataaagtg
acggacgtgattgatgtcactatcgcggaagtccgtatggaaacccgtagcgtgattgcg
cgtccggtcgcctga
DBGET
integrated database retrieval system
