Laccaria bicolor: LACBIDRAFT_336047
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Entry
LACBIDRAFT_336047 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
lbc
Laccaria bicolor
Pathway
lbc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LACBIDRAFT_336047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbc03019
]
LACBIDRAFT_336047
Messenger RNA biogenesis [BR:
lbc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LACBIDRAFT_336047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Nup54_C
HWE_HK
Motif
Other DBs
NCBI-GeneID:
6086661
NCBI-ProteinID:
XP_001891000
JGI:
336047
UniProt:
B0E482
LinkDB
All DBs
AA seq
555 aa
AA seq
DB search
GGLFGGSTTAQQPAAGGGLFGSTTQQPAAGGGLFGSTQQPAAGGGGLFGGSTTTQQPATG
GGMFGSTSTTQQPAAGGGGLFGRTTSSQPAPAGGLFGSTTTTTQPSGGGLFGNTQPTNTN
TGGGLFGGGTTTAGQGTTGGGGLFGGSQAKPGGGGLFGSTTTTTAPTGTSNLFGGGQQQQ
QSNLFGGSTNTNPLLGGGKNFFGGSTLGTSAFGGGGQQPLQPTGSLLSSRSLGGLGGAQQ
NDPASQHANITARFEGIYNAWNSASPQCRFQHNFYNLVDPNQVNLYGRPPNATNDALWEK
ALRENPDPSCMVPVIAIGFDDLRDRVEAQNQQSTTHTKKLTDLKSRLEALSSAHAIQNST
RLLRASAKQTQIVHRLLGFVQHLHLLIPSVRSSAIRPEEEEMRGKLEEIEDEIRKGRVKG
RLNELWALLGAVNASIERGRGGTAEWAVVDDEGLGQIAQILSEQQAGLAHLTKILQKCQR
DLAVIMGTAAPGAGGAGGGMNGDEGVEGEKLWSNLWSSTNTLRENVYAECAFPRPSSERV
SPKWSIFRAVDQFEL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ggaggactttttggaggctctacaacggcacaacagccagctgcaggtggcggtcttttt
gggagtacgacgcaacaaccagctgcaggtggaggtctctttgggagcacgcaacagcca
gctgcgggtggcggcggtctttttggaggctctacaaccacgcaacagccagctacaggt
gggggcatgttcggcagtacgtccacaacccagcaaccagctgcgggtgggggtggtctt
ttcggcaggacgacgagctcacagccagctccggctggcggtctttttgggagcacaacg
accaccactcaacccagcggcgggggtctatttgggaacacccaacctaccaatacgaat
acaggcggggggttgttcggcggtggtacgacgacggctggccagggtacaactggcggt
ggcggcttatttggaggtagccaggcgaaaccgggtggtggaggcttgtttgggagtacg
acgacgacgaccgccccgacgggtactagcaacttgttcgggggtggccagcagcagcag
caatccaatttattcgggggtagcactaacacgaatccgctgttgggcggcggtaaaaat
ttctttgggggtagtacccttggaaccagcgcttttggcggcggggggcagcagccacta
cagcctactgggagccttctttcgtctagatcgcttggagggttgggaggagcgcagcaa
aatgatcctgcgagtcagcatgcgaatatcactgctaggtttgaagggatatataatgcg
tggaactctgcttctcctcagtgtcggtttcagcacaacttttacaatctcgtggatccg
aaccaagtcaacttgtatggccgcccgccaaatgctactaatgacgccctttgggaaaag
gcattgcgagaaaaccctgatccttcctgcatggtacccgtaatagccatcgggttcgac
gacctacgcgatcgcgtcgaagcccaaaaccaacaatcaacaacccacaccaaaaaacta
acagacctcaaatcgcgcctcgaagccctctcctccgcacacgccatccaaaactccacc
cgcctcctccgcgcatccgcaaaacaaacacagatcgtgcatcgattgttgggcttcgtg
cagcatttgcatttgttgattccgtcggttaggtcgtcggcgatcaggccggaggaggag
gagatgaggggtaagttggaggagattgaggatgagattaggaagggacgggttaaagga
cggttgaatgagctttgggcgttgcttggggctgttaatgcgagtattgagaggggacga
gggggaacggcggagtgggccgttgttgatgatgaggggttggggcagattgcgcagatc
ctttcggagcagcaggcggggctggcgcaccttaccaagattttacaaaagtgccagaga
gatttggcagttattatggggactgcggcacctggtgctggtggtgctggtggtgggatg
aatggagatgagggggttgagggggagaagctttggagtaatctttggagttcgacgaat
accttgcgggagaatgtatatgctgagtgtgcattccctcgtccttcgtccgagcgcgtg
agtccgaagtggagcatttttcgtgctgtcgatcaatttgaactttga
DBGET
integrated database retrieval system