Leadbetterella byssophila: Lbys_1656
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Entry
Lbys_1656 CDS
T01350
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
lby
Leadbetterella byssophila
Pathway
lby03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lbys_1656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lby03400
]
Lbys_1656
DNA repair and recombination proteins [BR:
lby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lbys_1656
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Lbys_1656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_30
Kinesin
AAA_16
SWI2_SNF2
AAA_19
AAA
AAA_7
Microtub_bd
AAA_33
ATPD_C_metazoa
DUF87
Selenoprotein_S
DUF5645
Motif
Other DBs
NCBI-ProteinID:
ADQ17364
UniProt:
E4RYW7
LinkDB
All DBs
Position
1733261..1735285
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AA seq
674 aa
AA seq
DB search
MSYKLTSAFQPTGDQPQAIEQLVASVQSGEKATVLLGVTGSGKTFTIANVIQRLDMPVLI
LSHNKTLAAQLYGEFKQFFPENAVEYFISYYDYYQPEAYIATTNTYIEKDLMINQEIDKL
RLSTVSSLMSGRKDVIVVASVSCIYGAGNPNEFKQSIVKVGVGDTISRNRLLYDLVAILY
SRTEAEFNRGTFRVKGDTVDIYPGYADFAIRIIFWGDEVEEIQTIDPHSGKKIKSETKIS
IFPANLFVTGKDALQTSIRQIQDDLVTQIKYFESEGRQIEAERIQERTEFDLEMMRELGY
CNGIENYSRYFDRRMPGERPFCLLDYFQDDFLLVVDESHVSIPQIGAMYGGDRSRKTSLV
EYGFRLPSALDNRPLTFQEFEQLTPQTIYVSATPANYELNKAGGVVVEQIIRPTGLLDPE
IEVRPSLNQIDDLLEEINDRIKKEERTLVTTLTKRMAEELSRYLERIGIKVAYIHSEIKT
MDRVEILRELRLGTIDVLVGVNLLREGLDLPEVSLVAIMDADKEGFLRDNRSLIQTIGRA
ARNSNGKVIMYADKITGSMQQAIDETQRRRAIQMEYNKAHGITPKTILKSKEAIMEQTSI
ADFKAVPKSYYVEPDKANIAADPVVAYMNKEQLEKLMQEAKSNMEKAASELNFLQAARYR
DEMLQLQERLSNLA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagctataaacttacgtccgcatttcaacctacaggtgaccagccccaagccatagaa
caactcgtagcctccgtccaatccggtgaaaaagctaccgtacttttaggtgttacaggt
agtggaaagacgttcactatagctaatgtcattcaacgcttggatatgcctgtgctgatc
ctcagccataacaagacactcgcggctcagctttatggagaattcaaacaattttttccc
gaaaatgccgtagagtactttatttcttattacgattattaccaacctgaagcctatata
gccaccacaaacacctacatagagaaagatctgatgatcaatcaggagattgacaaactt
cgactctctaccgtatcctccctcatgtctggaagaaaggatgtaatagtagtggcctcc
gtgtcttgcatctatggtgcaggtaacccaaatgaattcaaacaaagtatagttaaagta
ggcgtgggagataccatcagtagaaaccgcctcctatatgatttagtggccatactatat
tccagaacagaagctgaattcaatagaggaaccttccgcgtcaaaggagacaccgtagac
atctaccccggatatgctgacttcgccattagaatcatcttctggggagacgaggtggaa
gagatacaaaccatagacccccattctggaaagaaaatcaagtcggaaacgaagatttct
attttccctgctaaccttttcgtgacggggaaagatgcactgcaaacttccatccgtcag
attcaggatgacctggttacccaaatcaaatattttgaatctgaaggccgacaaatagaa
gccgaacgcattcaagaaaggacagaatttgatctggaaatgatgagggaattaggatac
tgtaatggtattgaaaactattcccgttactttgaccgaagaatgccgggagaaagaccc
ttctgtcttttggattactttcaagatgattttctattggtagtagacgaaagccatgtg
agtatacctcaaataggtgccatgtacggtggcgatagatcccgtaaaacctctctggta
gagtacggtttccgtttgccatctgctttggataaccgaccactgaccttccaggagttt
gaacaactcacccctcaaaccatctacgtgagtgctacacctgcaaattatgagctgaac
aaggccggtggggttgtagtagaacaaatcattcgtcctacggggctcttagaccctgaa
atagaggtacgtccgagtctaaatcagatagatgacctattagaggaaatcaacgataga
atcaagaaagaggaaagaaccctggtcactaccttaaccaaaagaatggcggaggagcta
agcagatacttggagagaattggtataaaggtagcttacatacattcagagatcaaaacc
atggaccgagtagagatcttaagagagcttcgtctaggcaccatagacgttctcgtaggg
gttaaccttctcagagagggattagaccttccagaggtctctttagtggccataatggac
gctgataaggaaggattccttagagataacaggtctttgattcagaccattggtagggcg
gccagaaattcaaacgggaaagtaatcatgtatgccgataagatcacaggatccatgcag
caggccatagatgaaacccaaaggcgtagagccattcagatggagtacaacaaagctcac
ggtatcacgcctaagaccattttgaaaagcaaagaagccattatggaacaaacttccatt
gctgactttaaagctgtaccaaaaagttactatgttgaaccggataaagcgaatatagct
gctgaccctgtagtagcctatatgaataaggagcaattagagaaattaatgcaggaggcc
aaatcaaacatggaaaaggccgccagcgaattgaatttcttgcaggcggcccgttacaga
gacgaaatgctccagttgcaggagcggctttcaaatctggcttag
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integrated database retrieval system
