Leishmania braziliensis: LBRM_27_1830
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Entry
LBRM_27_1830 CDS
T01113
Name
(RefSeq) conserved hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
lbz
Leishmania braziliensis
Pathway
lbz03008
Ribosome biogenesis in eukaryotes
lbz03013
Nucleocytoplasmic transport
lbz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LBRM_27_1830
03015 mRNA surveillance pathway
LBRM_27_1830
03008 Ribosome biogenesis in eukaryotes
LBRM_27_1830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbz03019
]
LBRM_27_1830
03009 Ribosome biogenesis [BR:
lbz03009
]
LBRM_27_1830
Messenger RNA biogenesis [BR:
lbz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LBRM_27_1830
mRNA cycle factors
Stress granule specific factors
LBRM_27_1830
Ribosome biogenesis [BR:
lbz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
LBRM_27_1830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
zf-CCCH_2
zf-CCCH
zf_CCCH_4
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
5416803
NCBI-ProteinID:
XP_001565938
UniProt:
A4HFU4
A0A3P3ZAC6
LinkDB
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Position
27:711954..713804
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AA seq
616 aa
AA seq
DB search
MSRPYKKSKGAGGITKYNTPCKFFLRGSCSNQRCPYLHVRNQTVIRSTSHKEVAAQEGNG
TVKVMSTMLKLFFEKQTQLIYNAETGMLNLSKLASYDDLSSVASSINFNTRTFCVALCTC
IRELVSPPPAVLQLDRNELKGFHHLGKALEEAGLHASLRALSLAHNNITSTTIAQELKHF
SNLTELSLVGNPVRENVDYKLNFKKCVPWLQGLDGESMAAPPLELPWPRFFDPKHTLTDE
GSAAQGFFSSVRGYDSIQKALLHFIQSAVLNPLEMEPAPGLLTGVDAVSDVYALNATFTF
SLVSTEAAVSTPSRTAGGSAASTQRDVVREIVGFRMRQTESNHNVLLGLKSTTVAVGRTS
VCAKLEHVLYPKNFVVGHYIHESPDVAVLDNKGFGPNAIVGMKQPLSVITLHGVMLWRYR
TTGSDADVQHASLLRDALVIKRNFSRVITVSSTEPDRWHIVNDMVTLFPFRGGSGNEGEL
GASNPASGGAGVSTAPLTPESILFRDVHPYDVVFSPATDPKRAALIARRYRVPAPIVTTL
CSVVHSDRELAVILVDLTDIPLEVYEQCAPVVEMDPLASIFLCRIGNRFSIEPAEGVVLL
QKYGLDWPAIEQAVSR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggccgtacaagaagagcaaaggggctggggggataaccaagtacaacacgcca
tgcaagttcttcctgcgcggcagttgctctaatcagcgctgcccctacctacacgtccgc
aaccagacggtgatacggtcgaccagccataaggaggttgctgctcaggaaggaaatggc
actgtgaaggttatgtcgacgatgctgaagctgtttttcgagaagcaaacgcagctcatc
tacaacgcggaaactggaatgctgaatctgtcgaaactcgcatcctacgacgacctgtcc
tctgtcgcctccagcatcaactttaacacgcgcaccttttgcgtagcgttgtgcacgtgc
attcgcgagctggtctcgccgccgccggccgttctgcagctcgaccgcaatgagctgaaa
ggcttccaccacctcggaaaagccctcgaggaggcgggtcttcatgcgtctctgcgtgcc
ctgtcgctggcgcacaacaatatcacgtccacgaccattgcacaggagctgaagcacttt
tcgaacctgacagagctgagcctcgtcggcaaccccgtcagggagaacgtcgactacaag
ctaaatttcaagaagtgtgtaccgtggctccagggtcttgacggggaaagtatggcggcc
ccgccgctggagctgccgtggccgcgattctttgaccccaaacacacgctgacggatgag
ggcagcgccgctcaaggcttcttctccagcgtacggggttacgacagcatacagaaggca
ttgctgcacttcatccagtcggcagtgctgaacccgctcgagatggagccggcccccggt
ctgttaaccggcgtggatgccgtatcagacgtctacgcgctcaacgcgacgtttaccttt
agcctggtatccactgaggccgccgtctcgacgccgagtcgaacggctggtggcagtgct
gcctcaacgcagcgcgatgtggtgcgtgagattgtgggcttccgcatgcgtcagacggag
agcaaccacaacgtgctcctcggcctcaagtcaacgacggtggcagttggtcgaacgagc
gtgtgcgccaagctcgagcacgtgctgtatccgaagaacttcgttgtgggccactacatc
catgaaagtccggatgtggcggtgctggacaacaaagggttcggccccaacgccattgtg
ggaatgaagcagccgctctctgtcattaccctgcatggcgtgatgctttggcgctaccgc
accaccgggtctgacgccgatgtgcagcacgctagtctcttacgcgatgccctcgtcata
aagcgcaacttctcacgcgtgatcacggtgtcgtcgacggagccggaccgctggcacatc
gtgaatgacatggtcactctcttccccttccgcggcggcagcggcaatgaaggcgagttg
ggagcctcgaaccctgcgagcggcggcgcaggtgtgagcaccgcccccttgacaccagag
agcattctcttccgtgacgtgcatccgtacgacgtcgtctttagccctgccacggatccg
aagcgggcggcgcttattgcgcggcggtaccgcgtgcctgcccccatcgtaaccactttg
tgttcagtcgtacactcagacagagaattggctgtcatcttggtggacttgactgacatt
ccgttggaggtgtacgagcagtgcgccccggttgtcgagatggatccgctcgcgagcatt
tttctttgccgtatcggcaaccgcttcagcattgagccggctgagggggttgtgctgctg
caaaagtacggacttgactggcctgccattgagcaggcagtcagccggtga
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