Lates calcarifer (barramundi perch): 108874428 Help Entry 108874428         CDS       T04895                                  Symbol col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism lcf  Lates calcarifer (barramundi perch) Pathway lcf04510   Focal adhesion lcf04512   ECM-receptor interaction lcf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lcf00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108874428 (col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108874428 (col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     108874428 (col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lcf04147]     108874428 (col4a4)    00536 Glycosaminoglycan binding proteins [BR:lcf00536]     108874428 (col4a4) Exosome [BR:lcf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    108874428 (col4a4) Glycosaminoglycan binding proteins [BR:lcf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    108874428 (col4a4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  108874428 NCBI-ProteinID:  XP_050921465 LinkDB All DBs Position LG21:complement(808257..836001) Genome browser AA seq 1683 aa AA seqDB search MLLTSWSVSFSYTWLRCLLMILTAPPAVLGGDQTEPCAGRDCSTCQCFPAKGARGSPGAL GQQGLQGPPGFPGAQGPPGEKGMRGDEGLTGAAGLKGDMGNVGAPGFPGLEGVPGHPGPA GGPGFPGLDGCNGTRGQRGDPGYSGEQGIDGAPGLPGPKGFPGDPSVYFIQYPGIPGDVG PSGLPGLQGEQGLPGPMGGLGPSGLDGTNGLPGLPGFRGPPGEKGRSLPGQKGDEGDQGL QGPPGPFEYVDPPEDLYIKGEKGPRGIKGVCGAKGLPGLRSLPGIKGEKGILGFPGPRGF TGRPSFPGEKGIKGIQGNPGLPGLIGREGPKGMMGDPGLKGFPVVSDITNKGAIGDSGAP GLAGPPGNVGLRGMDGPPGPPGRAIPGPEGAVGERGVPGSKGERGDPGQVYIVEITPGEP GKPGRPGLKGQKGEPGSPGRYCLPGIPGQHGEPGQQGHPGAQGLQGFKGNRGNCDCGPPV VLRGPPGPMGDSGNPGFPGAPGSPGERGQNGNPGNPGERGKPGLTGYPGVKGVKGQKGVV IEVEIGGEKGSRGPPGPPGREGLSGRRGLDGVPGATGDPGPEGESLDSFPGDRGLPGFSG QKGSSGPPGATGVGIVGAIGNRGPPGDPGRQGYPGFPGLQGPKGDTLPCAPKNPGPPGEK GDPGNPGNPGLQGSAGFRGITGPDGVKGDKGGSGFPGIPGRQGPMGIVGDIGDEGPDGDS YAGDPGSPGIPGFPGLRGPTGDPDGGPSGPIGFPGPLGAQGPKGVPGPPGKDGLPGVLGL SGGPGPKGQRGQDGAPGVTGPQGPSPKVCDAGKPGSRGPIGPRGPIGQPGFQGEKGDMGE LGAQGIGSKGPVGKPGTPGSPGYPGIQGPSGLIGNSGLPGPNGQKGPLGSPGRCGGPGVP GKTGAPGGPGRTGERGFVGRDGAHGCEGQKGEKGCQGPPGPPGETRFVLIKGDRGKPGPF GISGFPGPRGNKGFPGATGRPGYQGIRGPPGFVGPPGPPGPCGKPGPQGPPGRRGPPGVI GFPGETGDPGDPGCRGKYGEPGLPGCPGEKGDKGDSISCPGLPGNKGPPGDFGPSGTPGP PGYPGRPGPIGAPGQKGCKGDPGHCGDPGPAGVIGPEGPRGHPGLPGNPGKAGADGPPGQ QGCPGLQGPPGPLGLHGLDGLKGVKGDMGTRDQFQSQRLQDIINVGVGPVLQVIPGLPGD KGPQGPQGPSGTSQPGPPGPKGPPGPKGPPGVCGPAGKPGPDCKDPFPGPPGDCGYPGSD GEPGCPGAMGDPGPNPPVPGDEGDNGAPGYCGPPGEKGSPGPTGPPGCPGDAGVKGIKGS QGLMGVPGGRGPRGHPGVKGPPGPKGFSGPMGPKGERGEVSPCPTYPPAQQGPPGPPGPC GDPGEKGLSGEIGLRGLQGMKGDPGSEGPIGPVGPPGQDGDRGEPGLQGESGVVGAKGEP GPIGDRGFPGPTKHLNSGFLLVRHSQSKNIPTCPLNMRALWHGYSLLYLEGQEKAHTQDL GQAGSCMRVFSTMPFSSCNMGACAYASRNDKSYWLSTTVAVPSLPVDGPSIEDHISRCVV CEAPSSPVALHSQTANQPLCPPNWTSLWTGYSFLMHTGAGDEGGGQSLTSSGSCLTDFRA QPFVECQGPRGTCHYFSNIYSFWLTRVETSPYNDPSTTLTEGWQQRGNIGRCNVCMREHE GVR NT seq 5052 nt NT seq  +upstreamnt  +downstreamnt atgctgctgacttcctggtccgtctccttcagctacacctggctcaggtgcctcctgatg atcctgacggctcctcctgcagttctcgggggcgaccagacggagccgtgcgccgggcgg gactgctccacctgtcagtgtttcccagccaaaggagcaaggggttctccaggtgctctg ggacagcagggtcttcaggggcccccggggttcccgggtgctcaagggcctccaggagaa aagggcatgagaggagatgaggggctgacaggagctgcaggactgaaaggagacatggga aatgtcggtgctcctggttttcctggtttagagggagtcccgggtcatccgggtcctgct ggaggtcctggttttccaggtctggatggttgtaatgggaccagagggcagagaggagat cctggatattctggagaacagggaattgatggtgcaccgggtcttccaggaccaaaggga tttccaggagatccatcagtctacttcatacagtaccctggaatacctggagacgtcgga cccagtggacttcctggactacagggggagcagggtctacctggaccaatgggaggactg ggtccatcaggattggatgggaccaatggtctccctggtctgcctggtttcagaggtcca cctggagaaaaaggtcgatctctgcctggacagaaaggagacgagggggatcagggcctc caggggcctccagggccatttgagtacgtcgaccctccagaagacctgtacatcaaagga gagaagggtcctcgggggattaaaggagtctgtggagctaagggactgccgggtctgcgc tctctaccaggaatcaagggagagaaagggattctgggatttcctggacccaggggattt actggcagacctagttttcccggagagaaaggaatcaaggggattcaaggaaatccaggt ctcccaggtctgattggacgagaaggtcctaagggtatgatgggagatccaggtcttaaa ggcttccctgtggtgtcagacatcacaaacaaaggtgccatcggggattctggggccccc ggactggctggcccaccaggaaacgtggggctgagaggaatggatggtcccccaggaccc cccggtagagccatacctggaccagaaggtgctgtgggtgagagaggagttccaggatcc aagggggaaagaggagatcctggtcaggtttatatagtggaaattacacctggagaacct ggaaaaccaggacgacccggacttaaaggacagaaaggagaaccaggaagtccaggtcgt tactgtcttcctgggatcccaggacaacatggagagccaggtcaacagggacacccaggg gctcagggcctccaagggtttaaaggcaatcgtgggaactgtgattgtggccctcctgta gtattgaggggccccccaggacctatgggagattcagggaatccagggtttccaggagcc ccaggaagcccaggggagagaggacagaatggaaacccaggaaaccctggagagagaggg aaaccgggtctgactggatatccaggtgtgaagggggtcaaaggtcagaagggagttgtc attgaggtggagattggaggtgagaagggaagcaggggcccacctggccctccaggcaga gaaggactctcagggagaagaggacttgatggggtccccggggccaccggagaccctggt cctgagggtgaaagtttagacagctttcctggagatagaggcctcccaggattttcaggg caaaaggggtcatcaggacctccaggtgccaccggagtgggtatagtcggtgcaatagga aatcgtgggccccctggggacccaggtcgtcaaggatacccaggttttccagggctacag gggcctaaaggtgacactctgccctgtgcacccaaaaaccctggcccccctggggagaag ggagaccctggaaacccaggaaacccaggactccagggttctgcaggttttcgtggcatc actggacctgatggagttaaaggagacaaaggagggtctggattccctggaatacctgga agacaaggacctatgggtattgttggagatattggagacgaaggacctgatggcgacagt tacgctggagatccaggttctccggggatcccaggctttcctggactcaggggcccaaca ggggaccctgatggtgggccttcaggacccattggattcccgggaccacttggtgctcag ggacctaagggagtccctggtcctcccgggaaagatggactaccgggagtcttgggtttg tccggtggccctggaccaaagggccagagaggacaggatggagcaccaggtgtaactggt ccccaaggcccctcacctaaagtctgcgatgcaggaaaacccggttccaggggccctatt ggccctcggggacccattggacaaccaggctttcagggagagaaaggtgacatgggggag ctgggtgctcaaggtattggctctaaaggccctgtaggtaaaccaggcactccaggttcc ccagggtacccagggatccaaggcccctccggcctcattggaaactcaggactgccaggg cccaatggtcagaaaggtccgttggggtccccaggcaggtgcggagggccaggggttccc gggaagaccggggcccctggaggtccggggagaacaggggagagagggtttgttggacgt gacggagctcatggatgtgaagggcaaaaaggagaaaaaggctgtcaagggcccccaggg cctccaggagaaaccaggtttgtcctcatcaaaggagacagaggaaaaccaggacccttt ggcatcagcggcttccctggaccacgaggaaataaaggttttccaggagctacaggtagg ccagggtatcaaggcatcaggggacccccaggcttcgtaggaccaccaggacctcctgga ccctgcggtaagccaggtccccaaggaccacctggacgtcgaggacctccaggagtcatc ggcttccctggagagaccggagatccaggtgatccgggatgtcgaggaaaatatggagaa cctggtcttccaggatgtcccggagagaaaggtgataaaggagactctattagttgtccc ggtctacctggaaacaaggggcctcctggagactttgggccctcaggaactcctggacca ccaggatatcctggaagacctggtccaatcggggctccgggacagaaaggatgcaaagga gatccagggcactgcggagaccctggtccagcaggggtgatcggtccagaaggtcctaga ggtcatccaggtttaccagggaatcctggaaaggcgggtgctgatggtcctccaggacag cagggctgcccgggactccaaggtcctcctggaccactgggacttcatggactggatgga cttaaaggagtgaagggggacatgggcaccagagaccagtttcagagtcagagattacag gacattataaacgtcggggtgggcccggtcctccaggtcattccaggtcttccaggggat aagggtcctcaaggtcctcaaggtccctctggtacatcccagcctggtccaccgggaccc aaaggccctccaggaccaaaaggacctccaggtgtttgtggacctgcaggtaaacctgga ccagactgtaaagatccattcccaggccctcctggagattgtggttatcctggatcagat ggagagccaggttgtccgggggccatgggagacccaggtccaaaccctccagtacctgga gatgaaggggacaacggggcccctggatactgtgggccaccgggcgaaaagggttctcca gggcccactggtccgccaggctgccccggggatgctggagtgaaaggaataaaggggtca caaggcctgatgggagtacctggtggtcggggtcctagaggtcatcctggtgtcaaagga cctccaggaccaaaaggatttagtggaccgatgggtccaaagggagagaggggagaagtc tctccctgccccacttaccctcctgcccaacagggccccccaggtccccctggcccctgt ggagaccctggagagaaaggacttagcggagaaattggcctgaggggccttcaaggcatg aagggggatcctggatctgagggaccaataggccctgtgggacccccaggtcaagatgga gacagaggagagccaggcctgcagggggagagtggagtagtgggagccaaaggtgaacct ggtccaataggtgacagaggttttcctggaccaaccaaacacttgaactcgggcttcctg ttggtgaggcacagccaatcaaagaatatccccacctgtccattaaacatgagggcccta tggcacggatacagtctgctgtacctggagggtcaggagaaggctcacactcaggacctg ggtcaggcggggtcatgcatgcgtgtcttctccaccatgccgttctcttcctgtaacatg ggcgcctgcgcttatgccagccgtaacgataaatcctactggctgtcgacaacggtggcc gtccccagcttacctgtggacggaccctccattgaagaccacatcagccgctgtgtggtc tgcgaagctccctcctcacctgtcgcactgcacagccagaccgccaaccagccactctgc ccccccaattggacaagcctgtggaccggatactccttcctcatgcatacaggtgcaggt gatgagggcggtggccagtctctgacatcatcaggtagctgtctgacagacttcagggcc cagcccttcgtggagtgtcaggggcctcgaggaacctgccactacttctccaacatctac agtttctggctgaccagagtggaaacaagcccctacaacgatccctccaccacactgacc gagggctggcagcagagggggaacatcgggaggtgcaacgtctgcatgagggagcacgag ggagttcgatag

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