Lates calcarifer (barramundi perch): 108885024
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Entry
108885024 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: pyruvate dehydrogenase E1 subunit alpha 1b
KO
K00161
pyruvate dehydrogenase E1 component subunit alpha [EC:
1.2.4.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00010
Glycolysis / Gluconeogenesis
lcf00020
Citrate cycle (TCA cycle)
lcf00620
Pyruvate metabolism
lcf00785
Lipoic acid metabolism
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
lcf01210
2-Oxocarboxylic acid metabolism
Module
lcf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
108885024
00020 Citrate cycle (TCA cycle)
108885024
00620 Pyruvate metabolism
108885024
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
108885024
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
108885024
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
DXP_synthase_N
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
108885024
NCBI-ProteinID:
XP_018534725
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All DBs
Position
LG24:complement(19178071..19187188)
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AA seq
452 aa
AA seq
DB search
MQNMLTIISNALCRITGKNVGAQTVSELLIDLSEYVSLTSPAAPALAQTQRQPPKPPPVS
TRASVAQLVSPQADPLDTPGARVVVSRSFADFTPQATFDIKKCDLHRLEEGPPLKAELTR
EQGLQYYRTMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACAAGIEASINPSDHLITAY
RAHGYTYTRGVAVKEILAELTGRKGGVAKGKGGSMHMYAPHFYGGNGIVGAQVPLGAGIA
LACQYQGNNQICVTLYGDGAANQGQLFESFNMAALWKLPCIFICENNKYGMGTSVERASA
STDYYKRGDFIPGIRVDGMDVLCVREATQFAADHCRSGKGPIIMELQTYRYHGHSMSDPG
VSYRTREEIQEVRSKSDPISMLKERMLSNNMASPEEFKEIDVEIRKEVEDAAQYATSDPE
PPLEELCNHIFYNNPPLEVRGTNPWSKLKSVS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatatgttaaccatcatctctaacgctctttgtcggatcactggcaagaatgtg
ggagcccaaacagtgtctgagttgctgattgacctgtcagagtacgtcagtctaacctcg
ccagcggcgcccgccttggcacagacccagcggcaaccacctaaaccaccaccagtcagt
actagagcatctgtcgcacagttagttagcccccaggctgacccgctagacacaccaggt
gccagagttgtggtctcccgttcttttgctgacttcacccctcaggcgacctttgacatc
aaaaaatgcgacctgcaccgtctggaggagggccctccgttgaaggcggagctgactcgg
gagcagggtctgcagtattaccgcaccatgcagactgtgagacgcatggagctgaaagcc
gaccagctgtacaaacagaagatcatcagaggcttctgtcacctgtacgacggacaggaa
gcgtgtgctgcaggcatcgaggcatccatcaacccctctgaccacctgatcacggcttac
cgcgcccacggatacacctacacccgcggcgtcgccgttaaagagatcctggcagagctc
acaggtcgtaaaggcggcgtggccaaaggcaaaggaggttctatgcacatgtacgcccca
catttctatggaggcaacggcatcgtgggagcacaggttcctctgggagccggcatcgct
ctggcctgccagtaccaaggcaacaatcagatctgcgtcacgctctacggagacggagca
gccaatcagggtcagctcttcgagtcgttcaacatggccgccttgtggaagctgccgtgt
atcttcatctgtgagaacaacaagtacggcatggggacgtcggtggagagagcgtcggcc
agcaccgactactacaagagaggagacttcattccaggaatcagagttgatgggatggat
gttctgtgtgtcagagaggccactcagttcgctgcagatcactgcagatctggaaagggt
cccattataatggagctgcagacctaccgctaccacggacacagcatgagtgaccctggg
gtcagctaccgcactcgtgaggagatccaggaggttcgcagcaagagtgaccccatctcc
atgctgaaagagcgcatgctcagcaacaacatggcgtctcctgaggagttcaaggaaatt
gacgtggagatccgaaaggaggtggaggacgcggctcagtatgccacgtcagatccagag
ccgccgctggaggagctgtgcaaccacatcttctacaacaacccgccgctggaggtccgc
gggaccaacccctggtccaaactgaagtctgtcagctag
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