Lates calcarifer (barramundi perch): 108895966
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Entry
108895966 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04110
Cell cycle
lcf04114
Oocyte meiosis
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108895966
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108895966
04114 Oocyte meiosis
108895966
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108895966
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108895966
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108895966
03036 Chromosome and associated proteins [BR:
lcf03036
]
108895966
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108895966
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108895966
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108895966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
108895966
NCBI-ProteinID:
XP_018550499
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Position
LG7_1:complement(8140750..8181607)
Genome browser
AA seq
516 aa
AA seq
DB search
MSAISASEKVDGFTRKSMRKAQKQRKSQGSSQYRTHSALVELSPLPQLKDAPSTEQQELF
TQKLQQCCVLFDFFDSVTDLKSKEIKRATLNELVDYVSTNRGVLVESTYPEITNMISTNI
FRTLPPSENPDFDPEEDEPTLEASWPHMQLVYEFLLRFLENPDFQPSIAKRYIDQKFVLQ
LLELFDSEDPRERDFLKTILHRIYGKFLGLRAFIRKQINNIFLKFIYETEHFNGVAELLE
ILGSIINGFALPLKAEHKQFLMKVLIPLHTAKGLALFHAQLAYCVVQFLEKDPTLTEPVI
RGLLKYWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIQEPLFKQISKCVSNPHFQVAERA
LYFWNNEYILSLIEENIDKVLPIMFGSLYRISKEHWNPTIVALVYNVLKTLMEMNCTLFD
ELTSSYKADRQREKKKEQERDELWKKLDELRLSNAALVQNNSHGLPSVQNNNNNNNSNNN
NNDTQDKSIDSSAAVTTDDKEPDVGVAANESTPCAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccatctctgcatccgagaaagtggacgggtttacgcgaaagtccatgaggaag
gcccagaaacagagaaaatctcaaggctcttctcagtaccgcactcacagcgctttggtt
gagctttcaccgctgccgcagctcaaagatgccccctccacagagcagcaggaactgttc
acccagaaactccagcagtgttgcgtcctctttgacttctttgactccgtgacggacctg
aagagcaaggaaatcaagagggcgacgctcaacgagctcgtggactacgtttccaccaac
agaggggtgctggtggagtccacgtacccagagatcactaatatgatcagcaccaacatt
tttcggactcttccaccgagcgaaaaccctgattttgacccggaggaggatgaaccaact
ctagaggcttcatggcctcacatgcaactggtctacgagtttctcctgcgttttctagaa
aatccagacttccagcccagcattgcaaagcgctacattgatcagaaatttgttctgcag
ctcctggagctgtttgacagtgaggacccaagagagagggacttcctgaagacaatccta
catcggatctacggaaagttcctggggttgcgagccttcatcaggaagcagatcaacaat
atcttcttgaagttcatctatgaaactgagcacttcaatggagtcgctgagctgctcgaa
atcctgggaagtatcatcaatgggtttgcgttacctctgaaggcagagcacaagcagttc
ctgatgaaggtgcttatcccgttacacacagctaaaggactggcccttttccacgcacag
ctggcctactgtgtggtccagttcctggagaaggatcctaccctcactgaaccggtaatc
cgcgggctgctgaagtattggccgaaaacctgcagccagaaggaggtaatgttcctcggt
gaaattgaggagattctggatgtcattgagccaacgcagttcaagaaaatccaggagccg
ttgttcaagcagatctctaaatgtgtgtccaatccacactttcaggtagcagagcgagcg
ctgtacttctggaataacgagtacattctcagcctcatcgaggagaacatcgacaaagtc
cttcctatcatgttcggtagcctgtacagaatctccaaagagcactggaatccgacaatc
gtagctctggtctacaatgtgttgaagacattgatggagatgaactgcacgctgtttgat
gagttgacttcctcctataaagcagacagacaacgggagaagaagaaggagcaggagagg
gacgagctgtggaagaagctcgatgagttgaggctcagcaacgcagctctggtgcagaac
aacagccatgggctcccgagtgtccagaacaacaacaacaacaacaatagtaataacaat
aataatgacacccaggacaagagtattgattcctctgctgccgtcaccacagacgacaaa
gagcctgacgtcggcgtggcagccaatgagagcaccccatgtgccaaatga
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