Lates calcarifer (barramundi perch): 108896180
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Entry
108896180 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108896180
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108896180
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108896180
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108896180
03036 Chromosome and associated proteins [BR:
lcf03036
]
108896180
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108896180
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108896180
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108896180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_13
EF-hand_1
EF-hand_5
DUF61
Motif
Other DBs
NCBI-GeneID:
108896180
NCBI-ProteinID:
XP_018550737
LinkDB
All DBs
Position
LG19:complement(5515621..5520721)
Genome browser
AA seq
457 aa
AA seq
DB search
MAKEQQPHWSDILKRRIANSKKDERGEEEKKAEETELFTKYYTEWKGGNDKDQSYKNIPR
FYYRLPAEEEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQVPPVSGEEAMI
SYEAYLQVGEKAGPKCKKFFTARVYAKLLHNDPYGRISIMQFFNYVMRKVWLHQTRIGLS
LYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKI
KIQDILACSFLDDLLELRDEELSKESQESNWFSAPSALRVYGQYLNLDKDHNGMLSKEEL
SRYGTATLTSVFLDRVFQEYLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDMENQ
GYLNVFSLNYFFRAIQEQMKLHGQEPVSFQDVKDEIFDMVKPKDPYKITLQDLVNSCQGD
TVTSILIDLNGFWTYENREVLVANDNDSSNTADLDDT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaacaacagcctcactggtcggatattttgaaaaggaggatagcaaactcc
aaaaaagatgagagaggcgaagaagaaaagaaagcagaagaaactgagctgttcactaaa
tattacactgagtggaagggaggaaacgacaaagaccagtcctacaagaacatcccacga
ttctactatcggctaccagctgaggaggaagtattacttcagaagctgagagaagaatcc
agagctgtgttcctccagaggaagagcagagaactgttggataatgaggaactgcagaat
ctgtggttcctgctggataagcaccaggtacctccagtgagtggggaggaggcaatgatc
agttatgaagcctacctgcaggtgggggagaaggctgggcccaagtgcaaaaaattcttc
acagccagagtgtacgccaagctgctccacaatgacccttatggcagaatctccatcatg
cagttctttaactatgtcatgaggaaagtgtggctgcatcagacccggataggtctgagt
ctgtatgatgtggcaggacagggctacctcagagagtcggatctggagaactacatccta
gaactcatccctactctgcctcagctggatggactagagaagtccttctactctttctat
gtctgcaccgctgttcgcaagttctttttcttcctcgacccactccgaacaggaaagatt
aaaatccaggatatattagcttgcagttttctggacgacttgttggagctgagagatgag
gagctatctaaggagagtcaggagtccaactggttctcagccccatcagctctgcgagtc
tatggccagtacctcaacctggacaaggaccataacggcatgttgagcaaagaggagctt
tcacgctacggcacggccactctaacctcggtcttcctggacagagtgtttcaggagtac
ctcacctatgatggagaaatggactataagacctatctagactttgtgttggccttggaa
aacaggaaggagccagcagcattacagtatatctttaaacttctggacatggagaatcaa
ggatacctcaatgtcttctctctcaactacttcttcagggccattcaggagcagatgaag
ctgcacggtcaggagcctgtctccttccaggatgtcaaggatgaaatctttgacatggtg
aaacccaaagacccctacaaaatcactctccaggatctggttaacagttgccagggtgat
accgtcaccagcatcctgatcgacctcaacggtttctggacctatgagaacagagaagtc
ctggttgctaatgacaacgacagcagtaacacagctgacctcgatgacacctga
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