Leptothrix cholodnii: Lcho_3628
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Entry
Lcho_3628 CDS
T00681
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Lcho_3628
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lch01007
]
Lcho_3628
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lch03016
]
Lcho_3628
Enzymes [BR:
lch01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Lcho_3628
Amino acid related enzymes [BR:
lch01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Lcho_3628
Transfer RNA biogenesis [BR:
lch03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Lcho_3628
Prokaryotic type
Lcho_3628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ACB35882
UniProt:
B1Y4Y6
LinkDB
All DBs
Position
complement(4051841..4054702)
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AA seq
953 aa
AA seq
DB search
MTDALTKSFEPAPIEAKWAPLWEASGAYQPTLDPAKASFCIQLPPPNVTGTLHMGHAFNQ
TIMDSLTRYHRMRGDNTLWVPGTDHAGIATQIVVERQLQAQGVSRHDLGRKNFVAKVWEW
KEQSGSTITTQMRRMGDSVSWPHEYFTMDPKLSKVVTETFVRLFDEGLIYRGKRLVSWDP
ILKSAVSDLEVESEEEDGSLWHIRYPVDGSDESLVVATTRPETMLGDTAVMVHPEDERYT
HLIGKSVKLPITGRLVPVIADDYVDKAFGTGVVKVTPAHDQNDYQVGLRHQLPMLTIFTL
DAKVNDEHADVPEAYRGLDRFVARKQIVAQLEAEGLLVEVKKHKLMVPRCARTGQIIEPM
LTDQWFVAMTKQGANGKSIAEEAIEAVDSGDVQFVPENWVNTYNQWMKNIQDWCISRQLW
WGHQIPAWYGSSGELFVARNEDEARAKATAAGYTGELTRDEDVLDTWYSSALVPFSTLGW
PEQTLEQDLFLPSSVLVTGYDIIFFWVARMIMMTKHFTGRVPFKHVYIHGLVLDAHGKKM
SKSEGNVLDPVDLIDGIALPELLDKRSTGLRKPENAPKVRKATEKEFPDGIPGYGADALR
FTFASMASLGRSVNFDSKRCEGYRNFCNKLWNATRFVLMNTEGQDCGLMAHTQAECSVGG
PAHGYLNFSPADRWITSELQRVESTVEQGFAEYRLDFVASAIYQFVWDEYCDWYLEIAKV
QLNEAKAAGDEASARATRRTLIRVLETILRLLHPVTPFITAELWDVVAPVAGRKTVGGAE
SLVTAAYPKAQPERIDAKADAWVAQLKSLVGVCRTLRSEMGLSPAERVPLLTFGDAEFIA
QAAPVLKALAKLGEVQVLTDETAFNAATQAAPVVVAGAARLALKVEIDVVAERERLGKEV
ARLTGEIAKAEAKLGNESFVARAPAAVVAQERARLADFAATVIKLQDQLQRLA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccctgaccaaatcgtttgaacccgccccgatcgaagccaagtgggccccg
ctctgggaggccagcggcgcctaccagcccacgctcgatccggccaaggccagcttctgc
atccagctgcccccgcccaacgtgaccggcacgctgcacatgggccacgccttcaaccag
accatcatggactcgttgacgcgctaccaccgcatgcgcggcgacaacacgctgtgggtg
cccggcaccgaccacgccggcatcgccacccagatcgtcgtcgagcgccagctgcaggcg
caaggcgtgagccgccacgacctgggccgcaagaacttcgtcgccaaggtctgggagtgg
aaggagcaatcgggctcgaccatcaccacccagatgcgccgcatgggcgacagcgtgagc
tggccgcacgagtacttcacgatggacccgaagctctcgaaggtcgtcaccgagaccttc
gtgcggctgttcgacgaaggcctgatctaccgcggcaagcggctggtgagctgggatccg
atcctgaagtcggcggtgtcggacctggaagtcgagagcgaagaagaagacggctcgctg
tggcacatccgctatccggtggatggctcggatgaatcgctggtggtggccaccacccgt
cccgagaccatgctcggcgacaccgcggtgatggtgcacccggaagacgagcgctacacg
cacctgatcggcaagagcgtcaagctgccgatcaccggcaggctcgtgcccgtgattgcc
gacgattacgtcgacaaggccttcggcaccggcgtggtcaaggtgacgcccgcgcatgac
cagaacgactaccaggtcggcctgcgccaccagctgccgatgctgacgatcttcacgctc
gacgccaaggtcaacgacgaacatgccgacgtgcccgaggcttaccgcgggctggatcgt
ttcgtggcgcgcaagcagatcgtcgcccagctcgaagccgagggcctgctggtcgaggtc
aagaagcacaagctgatggtgccgcgctgcgcgcgcaccggccagatcatcgagccgatg
ctgaccgaccagtggttcgtcgcgatgaccaagcagggcgcgaacggcaagtcgatcgcc
gaagaggcgatcgaggcggtcgattcgggcgacgtccagttcgtgcccgagaactgggtc
aacacctacaaccagtggatgaagaacatccaggactggtgcatcagccgccagctctgg
tggggccatcagatcccggcctggtatggctcatcgggtgagctcttcgtcgcgcgcaac
gaggacgaggcccgcgccaaggccacggccgcgggttacaccggggagctgacgcgcgac
gaggacgtgctcgacacctggtactcgtcggcgctggtgccgttttccacgctcggctgg
cccgagcagaccctcgagcaggacctgttcctgccgagttcggtgctggtcacgggctac
gacatcatcttcttctgggtcgcccggatgatcatgatgaccaagcacttcaccggccgc
gtgccgttcaagcacgtctacatccacggcctggtgctcgacgcgcacggcaagaagatg
agcaagagcgaaggcaacgtgctcgacccggtcgacctgatcgacggcatcgcgctgccc
gagctgctcgacaagcgcagcaccggcctgcgcaagcccgagaacgcgcccaaggtgcgc
aaggcgaccgagaaggagttcccggacggcatcccgggttacggcgccgacgcgctgcgt
ttcaccttcgcgtcgatggcgagtctgggccgcagcgtcaacttcgacagcaagcgctgc
gagggctatcgcaacttctgcaacaagctctggaacgcgacccgcttcgtgctgatgaac
accgagggccaggattgcggcctgatggcgcacacccaggccgagtgcagcgtgggtggc
ccggcacacggttatctgaacttcagcccggccgaccgctggatcacgagcgagctgcag
cgtgtcgagtcgacggtggagcagggctttgccgagtaccggctcgacttcgtcgccagc
gccatctaccagttcgtgtgggacgaatactgcgactggtacctcgagatcgccaaggtg
cagctcaacgaggccaaggcggcgggcgatgaagcatccgcacgcgccacccgccgcaca
ctgatccgcgtgctcgaaaccatcctgcgcctgctgcacccggtcacgcccttcatcacc
gccgagctgtgggacgtggtcgcgccggtggccggtcgcaagacggtgggcggtgccgag
tcgctggtgacggccgcctacccgaaggcacagcccgaacgcatcgacgccaaggccgac
gcctgggtggctcagctcaagagcctggtcggcgtgtgccgcacgctgcgcagcgagatg
gggctgtcaccggccgaacgcgtgccgctgctgaccttcggtgatgccgagttcatcgcc
caggccgcgccggtgctcaaggcgctggccaagctgggcgaggtgcaggtgctgaccgac
gagaccgccttcaacgccgccacgcaggccgcgccggtggtggtggccggtgccgcgcgg
ctggcgctgaaggtcgagatcgacgtggtggccgagcgcgagcgcctgggcaaggaagtg
gcgcgcctgaccggcgagatcgccaaggccgaggccaagctgggcaacgagagcttcgtg
gcgcgggcgccggccgcggtggtggctcaggagcgcgcgcggctggcggactttgcggcc
accgtgatcaagctgcaagaccagctgcagcgtctggcctga
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