Leptothrix cholodnii: Lcho_4376
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Entry
Lcho_4376 CDS
T00681
Name
(GenBank) Superfamily I DNA and RNA helicase and helicase subunits-like protein
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
lch
Leptothrix cholodnii
Pathway
lch03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lcho_4376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lch03032
]
Lcho_4376
Enzymes [BR:
lch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Lcho_4376
DNA replication proteins [BR:
lch03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Lcho_4376
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
Lcho_4376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
UvrD_C_2
AAA_19
DEAD
UvrD-helicase
Helicase_RecD
UvrD_C
AAA_22
ResIII
AAA
SLFN-g3_helicase
AAA_16
AAA_25
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACB36627
UniProt:
B1Y0E8
LinkDB
All DBs
Position
4893573..4895552
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AA seq
659 aa
AA seq
DB search
MSLSDIRSALRDELEATPEHYDFKVLASERDGHLWRVTLQPGHAWAEGRYAAQLMLDDSF
DGSSAWWGGPPKGHASVLAIAPEDDQIILKDASAPPPGPDQLIRLYPPRFLNALADCWRD
DDWAGLAWASLRDLAAPSPVATERLDGAAFGWLRPAQRQALQLVGQSSSFLWGPPGTGKT
TALGVLLAEYLHVNAGARVLLLSTTNHAVDQAVLAVDKALQQKRREGLRGSVKRLGTRFV
ASAYRGREHLLPVFDPDLIARLSRAEAARPPTSDLQAYSRWSERVEGLRLQMRAESLRVL
RSARLAAMTTTRAAFTLKTLRELPPFDLVVFDEASQVSLAHTLALIPLGRARLFAGDPQQ
LAPVVRSASREARRWLGRSPFAEKPRGGPSVCLLDEQSRMAASICDLVSHLFYDGELRVA
ADARADPAWLATRTRPFGGIEADRHVHVETVAQDGGWSAAHRGPVRVASAEHIAQRVAQA
LAQGELAAHELVLLTPFRAQRALIRQRLAAHGVFQVKVSTVHRAQGSEAAVVIFDPADGA
QPFLRTEEAGRLINVALSRAQAKVVVYLSGADAANPVLAQIVNRLRLAGDARRATPIGEL
ALRSDFPACAVGLRVAIGRHAGEVSRASPDGRQLWMVNEASGAEQLFDAAFLRRKAAGA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttccgacatccgctcggccctccgcgacgagctggaggccacgcccgagcac
tacgacttcaaggtgctcgccagcgagcgcgacggccatctctggcgcgtcacgctgcag
cccggccacgcctgggccgagggccggtacgccgcgcagctgatgctcgacgactcgttc
gacggctcatcggcctggtggggcggcccgcccaagggccacgccagcgtgctggcgatc
gcgcccgaggacgaccagatcatcctgaaggacgccagcgcgccgccgcccggccccgac
cagctgatccgcctctacccgccgcgtttcctcaacgccctggccgactgctggcgcgac
gacgactgggccgggctcgcctgggccagcctgcgtgacctggccgcaccgagcccggtc
gcgaccgagcgcctggacggcgccgccttcggctggctgcgcccggcgcagcgccaggcg
ctgcagctggtcggccagtcgagcagctttctgtggggtccgcccggcaccggcaagacc
accgcgctgggcgtgctgctggccgagtacctgcacgtcaacgccggcgcgcgcgtgctg
ctgctgtcgaccaccaaccacgcggtcgaccaggccgtgctggcggtcgacaaggcgctg
cagcagaagcgccgcgagggtctgcgcggcagcgtcaagcggctcggcacgcgcttcgtg
gcgagtgcctaccgcggccgcgagcacctgctgccggtgttcgatccggatctgatcgcc
cgcctgtcacgcgccgaagcggcgcgcccgccgacctccgatctgcaggcctacagccgc
tggtcggagcgggtcgagggcctgcggctgcagatgcgcgccgagtcgctacgggtgctg
cgcagcgcccggctggcggcgatgacgaccacccgcgccgccttcacgctcaagacgctg
cgcgagctgccgccgttcgacctggtggtgttcgacgaggccagccaggtcagcctggcg
cacacgctggcgctgatcccgctcggccgggcgcggctgttcgcgggcgatccgcagcag
ctcgcgccggtggtgcgcagcgccagccgcgaggcgcgccgctggctcggccgctcgccg
tttgccgagaaaccgcgtggcgggccgtcggtctgcctgctcgacgagcagtcgcgcatg
gccgcgtcgatctgcgatctggtcagccacctgttctacgacggcgagctgcgcgtggcc
gccgatgcgcgggccgacccggcgtggctggcgacgcgtacgcggccgttcggcggcatc
gaggccgatcggcacgtgcatgtcgagaccgtggcgcaggacggcggctggtcggcggca
caccgcgggccggtgcgggttgcgtccgccgaacacatcgcgcaacgggtcgcgcaggcg
ctggcgcaaggcgagctggccgcgcacgagctggtgctgctgacgccgtttcgggcccag
cgcgcgctgatccgccagcggctggcggcgcacggcgtgtttcaggtcaaggtcagcacg
gtgcaccgcgcgcagggcagcgaggcggcggtggtgatcttcgacccggccgacggcgcg
cagccgttcctgcgcaccgaggaggccgggcggctcatcaacgtggcgctcagccgggcg
caggccaaggtggtggtctatctgtcgggcgccgacgcggccaatccggtgctggcgcag
atcgtcaaccggctgcggctggccggcgatgcgcggcgcgccacgccgatcggcgagctg
gcgttgcgctcggatttcccggcttgcgcggtgggcctgcgggtggcgatcgggcgccat
gccggcgaggtgtcacgcgcctcgcccgatggccggcaactgtggatggtcaacgaggcg
agtggcgccgaacagctgttcgacgcggccttcctgcgccgcaaggcggctggcgcctag
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