KEGG   Leptothrix cholodnii: Lcho_4376
Entry
Lcho_4376         CDS       T00681                                 
Name
(GenBank) Superfamily I DNA and RNA helicase and helicase subunits-like protein
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
lch  Leptothrix cholodnii
Pathway
lch03030  DNA replication
Brite
KEGG Orthology (KO) [BR:lch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lcho_4376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lch03032]
    Lcho_4376
Enzymes [BR:lch01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Lcho_4376
DNA replication proteins [BR:lch03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Lcho_4376
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Lcho_4376
SSDB
Motif
Pfam: AAA_12 AAA_11 AAA_30 UvrD_C_2 AAA_19 DEAD UvrD-helicase Helicase_RecD UvrD_C AAA_22 ResIII AAA SLFN-g3_helicase AAA_16 AAA_25 nSTAND3 AAA_18
Other DBs
NCBI-ProteinID: ACB36627
UniProt: B1Y0E8
LinkDB
Position
4893573..4895552
AA seq 659 aa
MSLSDIRSALRDELEATPEHYDFKVLASERDGHLWRVTLQPGHAWAEGRYAAQLMLDDSF
DGSSAWWGGPPKGHASVLAIAPEDDQIILKDASAPPPGPDQLIRLYPPRFLNALADCWRD
DDWAGLAWASLRDLAAPSPVATERLDGAAFGWLRPAQRQALQLVGQSSSFLWGPPGTGKT
TALGVLLAEYLHVNAGARVLLLSTTNHAVDQAVLAVDKALQQKRREGLRGSVKRLGTRFV
ASAYRGREHLLPVFDPDLIARLSRAEAARPPTSDLQAYSRWSERVEGLRLQMRAESLRVL
RSARLAAMTTTRAAFTLKTLRELPPFDLVVFDEASQVSLAHTLALIPLGRARLFAGDPQQ
LAPVVRSASREARRWLGRSPFAEKPRGGPSVCLLDEQSRMAASICDLVSHLFYDGELRVA
ADARADPAWLATRTRPFGGIEADRHVHVETVAQDGGWSAAHRGPVRVASAEHIAQRVAQA
LAQGELAAHELVLLTPFRAQRALIRQRLAAHGVFQVKVSTVHRAQGSEAAVVIFDPADGA
QPFLRTEEAGRLINVALSRAQAKVVVYLSGADAANPVLAQIVNRLRLAGDARRATPIGEL
ALRSDFPACAVGLRVAIGRHAGEVSRASPDGRQLWMVNEASGAEQLFDAAFLRRKAAGA
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgagcctttccgacatccgctcggccctccgcgacgagctggaggccacgcccgagcac
tacgacttcaaggtgctcgccagcgagcgcgacggccatctctggcgcgtcacgctgcag
cccggccacgcctgggccgagggccggtacgccgcgcagctgatgctcgacgactcgttc
gacggctcatcggcctggtggggcggcccgcccaagggccacgccagcgtgctggcgatc
gcgcccgaggacgaccagatcatcctgaaggacgccagcgcgccgccgcccggccccgac
cagctgatccgcctctacccgccgcgtttcctcaacgccctggccgactgctggcgcgac
gacgactgggccgggctcgcctgggccagcctgcgtgacctggccgcaccgagcccggtc
gcgaccgagcgcctggacggcgccgccttcggctggctgcgcccggcgcagcgccaggcg
ctgcagctggtcggccagtcgagcagctttctgtggggtccgcccggcaccggcaagacc
accgcgctgggcgtgctgctggccgagtacctgcacgtcaacgccggcgcgcgcgtgctg
ctgctgtcgaccaccaaccacgcggtcgaccaggccgtgctggcggtcgacaaggcgctg
cagcagaagcgccgcgagggtctgcgcggcagcgtcaagcggctcggcacgcgcttcgtg
gcgagtgcctaccgcggccgcgagcacctgctgccggtgttcgatccggatctgatcgcc
cgcctgtcacgcgccgaagcggcgcgcccgccgacctccgatctgcaggcctacagccgc
tggtcggagcgggtcgagggcctgcggctgcagatgcgcgccgagtcgctacgggtgctg
cgcagcgcccggctggcggcgatgacgaccacccgcgccgccttcacgctcaagacgctg
cgcgagctgccgccgttcgacctggtggtgttcgacgaggccagccaggtcagcctggcg
cacacgctggcgctgatcccgctcggccgggcgcggctgttcgcgggcgatccgcagcag
ctcgcgccggtggtgcgcagcgccagccgcgaggcgcgccgctggctcggccgctcgccg
tttgccgagaaaccgcgtggcgggccgtcggtctgcctgctcgacgagcagtcgcgcatg
gccgcgtcgatctgcgatctggtcagccacctgttctacgacggcgagctgcgcgtggcc
gccgatgcgcgggccgacccggcgtggctggcgacgcgtacgcggccgttcggcggcatc
gaggccgatcggcacgtgcatgtcgagaccgtggcgcaggacggcggctggtcggcggca
caccgcgggccggtgcgggttgcgtccgccgaacacatcgcgcaacgggtcgcgcaggcg
ctggcgcaaggcgagctggccgcgcacgagctggtgctgctgacgccgtttcgggcccag
cgcgcgctgatccgccagcggctggcggcgcacggcgtgtttcaggtcaaggtcagcacg
gtgcaccgcgcgcagggcagcgaggcggcggtggtgatcttcgacccggccgacggcgcg
cagccgttcctgcgcaccgaggaggccgggcggctcatcaacgtggcgctcagccgggcg
caggccaaggtggtggtctatctgtcgggcgccgacgcggccaatccggtgctggcgcag
atcgtcaaccggctgcggctggccggcgatgcgcggcgcgccacgccgatcggcgagctg
gcgttgcgctcggatttcccggcttgcgcggtgggcctgcgggtggcgatcgggcgccat
gccggcgaggtgtcacgcgcctcgcccgatggccggcaactgtggatggtcaacgaggcg
agtggcgccgaacagctgttcgacgcggccttcctgcgccgcaaggcggctggcgcctag

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