Latimeria chalumnae (coelacanth): 102355943
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Entry
102355943 CDS
T02913
Symbol
TRRAP
Name
(RefSeq) transformation/transcription domain associated protein
KO
K08874
transformation/transcription domain-associated protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102355943 (TRRAP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcm01001
]
102355943 (TRRAP)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102355943 (TRRAP)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102355943 (TRRAP)
Protein kinases [BR:
lcm01001
]
Serine/threonine kinases: Other
PIKK family [OT]
102355943 (TRRAP)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102355943 (TRRAP)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102355943 (TRRAP)
STAGA complex
102355943 (TRRAP)
TFTC complex
102355943 (TRRAP)
TIP60 complex
102355943 (TRRAP)
SAGA complex
102355943 (TRRAP)
SLIK complex
102355943 (TRRAP)
NuA4 complex
102355943 (TRRAP)
Chromatin remodeling factors
ASTRA complex
102355943 (TRRAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tra1_ring
Tra1_central
ELMO_ARM
WGG
BALF1
Motif
Other DBs
NCBI-GeneID:
102355943
NCBI-ProteinID:
XP_006000847
Ensembl:
ENSLACG00000000614
LinkDB
All DBs
Position
Un
AA seq
2852 aa
AA seq
DB search
MAFVPAPGPTVVDQTTLMKKYLQFVIALTDVNTPDETKLKMMQEVSENFENVTSSPQYST
FLEHIIPRFLTFLQDGEVQFLQEKPAQQLRKLVLEIIHRIPTNEHLRPHTKNILSLMFRF
LEIENEENVLICLRIIIELHKQFRPQITQEIHHFLDFVKQIYKELPKVVNRYFENPQVIP
ENSVPSPDMVGMITSVTVKTNPERDDSETRTHTIIPRGSLSLKVLAELPIIVVLMYQLYK
LNIHNVVAEFVPLIMNTIMLQVSPQARQHKLYNKELYADFIAAQIKTLSFLAYIIRIYQD
LVAKYSQQMVKGMLQLLSNCPSETAHLRKELLIAAKHILTTDLRSQFIPCMDKLFDESIL
IGSGYTARETLRPLAYSTLADLVHHVRQHLPLNDLSLAVQLFAKNIDDESLPSSIQTMSC
KLLLNLVDCIRSKSELDNGNGRDILMRMLEVFVLKFHTIARYQLAAIFKKCKPQSELGAT
EAVIPGVPATPTAPGPPLPPTPATPVSLAPAPAPVFDKQGDKEKEDKQTFQVTDCRSLVK
TLVCGVKTITWGITSCKAPGETQFIPNKQLQPKETQIYIKLVKYAMQALDIYQVQIAVNG
QTYIRVANCQTVRMKEEKEVLEHFAGVFTMMNPLTFKEIFQTTVPYMVERISKNYALQIV
ANSFLANPSTSALFATILVEYLLERLPEMGSNVELSNLYLKLFKLVFGSVSLFAAENEQM
LKPHLHKIVNSSMELAQTAKEPYNYFLLLRALFRSIGGGSHDLLYQEFLPLLPNLLQGLN
MLQSGLHKQHMKDLFVELCLTVPVRLSSLLPYLPMLMDPLVSALNGSQTLVSQGLRTLEL
CVDNLQPDFLYDHIQPVRAELMQALWRTLRNPADSISHVAYRVLGKFGGSNRKMLKESQK
LHYTVTEVQGPSITVEFSDCKASIQLPMEKAIETALDCLKSANTEPYYRRQAWEVIKCFL
VAMMNLDDNKHALYQLLAHPNFTEKSIPSVIISHRYKAQDTPARKTFEQALTGAFMSAVI
KDLRPSALPFVASLIRHYTMVAVAQQCGPFLLQCYQVGSQPSTAMFHSEENGSKGMDPLV
LIDAIAICMAYEEKELCKIGEVALAVIFDVASIILGSKERACQLPLFSYIVERLCACCYE
QAWYAKLGGVVSIKFLMERLPLIWVLQNQQTFLKALLFVMMDLTGEVSNGAVAMAKTTLE
QLLVRCATPLKEEEKTEDLLAAREKSFHHVTHDLVREVTSPNSTVRKQAMHSLQVLAQVT
GKSVTDIMEPHKEVLQDMVPPKKHLLRHQPANAQIGLMEGNTFCTTLEPRLFTMDLNVVE
HKVFYTELLNLCEAEDAALMKLPCYKSLPSLVPLRIAALNALAACNYLPQSREKIIAALF
KAINSTNNELQEAGEACMRKFLEGATIEVDQIHTHMRPLLMMLGDYRSLTLNVVNRLTSV
TRLFPNSFNDKFCDQMMQHLRKWMEVVVITHKGGQRSEGNEMKICSAIINLFHLIPAAPQ
TLVKPLLEVVMKTERAMLIEAGSPFREPLIKFLTRHPSQTVELFMMEATLNDPQWSRMFM
SFLKHKDAKPLRDVLAVNPNRFITLLLPAGPQTAVRPGSPSTSTMRLDLQFQAIKIISII
VKNDETWLANQHSLVSQLRKVWVSEAFQERHRKENMVATNWKEPKLLAYCLLSYCKRNYG
DIELLFQLLRAFTGRFLCNMTFLKEYMEEEIPKNYSIAQKRALFFRFVDFNDPNFGDELK
AKVLQHILNPAFLYSFEKNDGEQLLGPPNPEGDNPESITSVFITKVLDPEKQNDMLDSLR
IYLLQFSTLLVEHAPHHIHDNNKNRNSKLRQLMTFAWPCLLSKACVDPACKYSGHLLLAH
IIAKFAIHKKIVLQVFHSLLKAHAMEARAIVRQAMAILTPAVPARMEDGHQMLTHWTRKI
IVEEGHTVPQLVHILHLIVQHFRVYYPVRHHLVQHMVSAMQRLGFTPSVTIEQRKLAVDL
AEVVTKWELQRIQDQPESDMDPNSSGEGTSSASSSVKRGLSMDSGQDVKRFRTATGAVSM
VFGRSQSLPGADALLSKPIDKQHTDTVVNFLIRIACQVNDSSNTAGSPGEVLSRRCVNLL
KTALRPDMWPKSELKLQWFDKLLMTVEQPTQANFANICTGLEVLSFLLTVLQSPAILASF
KPLQRGIAACMTCGNTKVLRAVHTLLSRLMSIFPTEPSTSSVASKYEELDCLYAAVGKVI
YEGLNNYEKAANANSTQLFGTLMILKSSCTNNPSYIDRLISVFMRSLQKMVRDHLSPQTA
PGGAETNTAATSELVMLSLDLVKTRLAVMSMEMRKNFIQVILTSLIEKSTDAKILRAVVK
IVEEWVKNSSPMAANQTPTLREKSILLVKMMTYIEKRFPEDLELNAQFLDLVNYVYRDEN
LSGSELTAKLEPAFLSGLRCSQPQIRAKFFEVFDNSMKHRVYERLLYVTCSQNWEAMGNH
FWIKQCIELLLAVCERSTTIGTSCQGAMLPSITNVINLADSHDRAAFAMVTHVKQEPRER
ENSETKEEEVEIDIELAPGDQSSTPKTKEQAEKDTGNQLHMLTNRHDKFLDSLREVKTGA
LLSAFVQLCHISTPLAEKTWIQLFSRLWKILSDRQQHALAGEVSPFLCSGSHQMQRDCQP
SALNCFVEAMSQCVPPIPIRPCVLKYLGKTHNLWFRSTLMLEHQAFEKGLSLQIKPKQTT
EFYEQESITPPQQEILDSLAELYSLLQEEDMWAGLWQKRCKFPESATAIAYEQHGFFEQA
QETYEKAMEKARKEHERNNASPAIFPEYQLWEDHWIRCSKELNQWEALTEYGQSKGHINP
YLVLECAWRVSNWAAMKEALVQVKKLIFSVTE
NT seq
8559 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgtcccagcaccaggaccgactgtggttgatcagaccacactcatgaaaaag
tatctacaatttgtcatcgctctgacggacgttaacacgcctgatgaaaccaagctgaaa
atgatgcaggaagttagtgagaattttgaaaatgtcacttcttccccacaatattctaca
ttcctggagcatatcatcccacggttccttaccttccttcaggatggagaagttcagttt
ctgcaggagaagcctgctcagcaattaaggaagctggttctggaaattatccatagaatt
ccaaccaatgaacacctgcgtccacatacaaaaaatattttgtccttgatgtttcgcttc
ttggaaatcgaaaatgaagaaaatgtacttatctgtctgaggattatcattgaattacac
aaacaatttaggccacaaatcactcaagagattcaccattttcttgactttgtaaagcag
atttataaggagctcccaaaagtggtgaatcggtactttgagaatccgcaggtgatccct
gagaactccgttccctcccctgatatggttggcatgatcacttcggttactgtgaaaacc
aaccccgaaagagatgacagtgagacaagaacacataccatcatccctagagggtcgctt
tccctgaaggtgctggctgaacttcccattattgttgtgttgatgtatcagctctacaag
ctgaacattcacaatgtggtggctgagtttgtgcctttgattatgaacaccatcatgctt
caagtgtcaccacaggccaggcaacataaattgtataacaaggaactctatgctgacttc
attgctgctcagattaagactctttcattcttggcatatataataagaatctatcaggac
ttagttgccaaatactctcagcagatggtgaaaggaatgttgcaacttttgtctaactgc
ccttctgaaaccgcacacctccgtaaagagctactgattgctgccaaacacattctcact
acggatctccgcagccaattcattccatgcatggacaaactgtttgatgagtccatacta
attggctctgggtacacggctcgggagacactgagaccgttggcatacagcactctggct
gatctagtgcatcatgttcgtcagcaccttccactcaatgatctctccctcgccgttcag
ctgtttgctaagaacattgatgatgaatccctacccagtagtatccaaactatgtcctgc
aagctccttctaaacttggtggactgcatccgttccaaaagtgaactggataatggaaat
ggcagggatattctcatgaggatgttggaggtctttgttttaaaattccacactattgca
aggtaccagttggctgctatctttaaaaagtgcaaacctcaatctgaacttggagcaaca
gaagctgttatacctggggtcccagccaccccaacagcccctggtcctcctctgcctcca
accccagccacacctgtttccctagctccagccccagctccagtatttgacaaacaggga
gacaaggaaaaagaggacaaacagacattccaagtaacagactgccgcagcttggtgaag
accctggtctgtggggtgaagaccataacttggggcataacatcatgtaaagcacctgga
gagactcagtttattcctaacaagcagctccagcccaaagagactcagatctatattaag
ctggtgaaatatgcgatgcaggcattggatatttatcaggtacagattgcagtgaatgga
cagacttacattcgggttgcaaactgccagacggtgaggatgaaggaagagaaggaggtt
ctagagcactttgctggagtttttacaatgatgaaccctttaacgtttaaagagatcttt
caaacaacagttccatacatggttgagagaatttccaaaaattatgctctacagattgtt
gccaattcatttttggcaaacccatccacgtctgctctgtttgctactattctggtggaa
tatcttcttgaaaggcttccagagatgggctccaatgtggaactctccaatctgtacctc
aagctctttaaactggtgttcggctcggtctctctctttgcagctgaaaatgagcagatg
ctcaagccccatttgcacaaaattgtaaatagttccatggagctcgcccagacggctaag
gaaccctacaactacttcctgttgctccgagccctcttcagatccattggagggggcagt
catgaccttctatatcaggaattcttaccgctgcttcccaacctactacaagggctaaac
atgcttcagagtggcctacacaagcaacacatgaaagatctctttgtagagctctgtctc
accgtaccagttcggctgagctccctccttccatacctgccaatgctgatggacccccta
gtgtcggcactgaatggatctcaaactcttgttagccagggactgcggacattggaattg
tgtgtggataacctgcagccggacttcctgtatgaccacattcagccagtgcgggcagag
cttatgcaggccttgtggcgcaccttgcgcaatcctgctgacagcatttctcatgtggca
tatcgtgttcttggcaagtttggtggcagcaacagaaaaatgttgaaggagtctcagaaa
ctgcactatactgtaacagaggtgcaggggcccagtatcacggtggagttttcagactgt
aaggcttctattcaacttcccatggaaaaggcaattgaaactgcactggactgtctgaaa
agtgctaacactgagccttattaccgaagacaagcctgggaggtgatcaagtgtttcctg
gtggccatgatgaacctcgatgataataagcatgccttataccaactccttgctcatccc
aattttacagagaagtccatacccagcgtaattatttcacatcgttataaagcccaggat
actcctgcccgtaaaacatttgagcaggcgctgacaggggccttcatgtcagctgtcatt
aaggatctgcggcccagtgctctgccttttgtggctagcctaatccgtcattataccatg
gtggcagtagctcagcagtgtggtccatttctgttgcagtgttaccaggtgggaagtcag
cccagcacagccatgtttcacagtgaggagaacggttccaaggggatggacccacttgtc
ctaattgatgccatagctatctgtatggcatatgaggaaaaggaactctgtaaaattgga
gaggtggcccttgctgtgatatttgatgtagcaagcatcatcttgggttcaaaggaaagg
gcttgtcagctgccgttgttttcttacattgtggagcggttatgtgcctgctgctatgaa
caggcttggtatgctaaactaggaggagtggtttcaattaaattcctgatggagcgactg
ccattgatctgggtcctgcagaaccagcagacattcctcaaggcccttctgtttgttatg
atggaccttactggagaggtttccaacggagcagttgctatggcaaagaccaccttggag
cagcttttggttcgttgtgcaactccgctgaaagaggaggaaaaaacagaggacctgctg
gctgcacgggagaaatcgttccaccacgtgacccatgacctggtgcgagaagtgacttcc
ccaaactctaccgtgaggaagcaggcaatgcactcactacaagtccttgcacaggtcact
ggcaaaagtgtgacagatattatggaacctcataaggaggtacttcaggacatggttcca
ccaaagaaacatttgcttaggcatcaaccagctaatgctcagattggcctaatggaggga
aacacgttttgtactactctggagccaagactttttactatggacttgaatgttgtggag
cacaaagtcttttacacagagctcctaaatctgtgtgaagctgaagacgctgcactaatg
aaactgccttgctataaaagtctaccatcacttgtacctctgcgaattgcggctttaaat
gcgctggctgcctgcaattatcttcctcagtccagggagaagattattgctgctcttttc
aaggcaattaattccaccaacaatgagctccaagaagcaggtgaagcttgtatgagaaag
tttttggaaggtgcaacgatagaggtagatcagatccatacccacatgagaccgctgctg
atgatgctgggagattaccgtagcctgacattgaacgtagtcaatcgactgacctctgtc
acgcggctcttccccaactctttcaatgataaattctgtgatcagatgatgcaacacttg
cgcaaatggatggaagtggtggtgatcacacataaaggagggcagaggagtgaaggcaat
gaaatgaaaatctgctctgctattatcaatctatttcacttgatccccgctgcaccccag
accctggtgaagcccctactggaggtagtgatgaaaacggagagagccatgttaatagag
gctggtagtccattcagagagccactgatcaagtttctgacccgccacccatctcagact
gtggagctcttcatgatggaagctactttgaatgatcctcagtggagcaggatgtttatg
agtttcttgaagcataaagatgcaaagccactccgagatgtgctggctgtcaacccaaat
cggtttatcaccttgttgttacctgctggcccccaaacagctgtccgacctggctcaccc
agcaccagcacgatgcgtttagacctgcagttccaggctatcaagatcattagtatcatt
gtgaagaacgatgagacctggctggctaatcagcactcattggtgagtcagctgaggaaa
gtatgggtgagtgaagccttccaggagagacatcgaaaagaaaacatggtggcaaccaat
tggaaagaaccaaagcttctagcatattgcttattgagttactgcaagcgcaactacgga
gatattgagttgctgtttcagctgctgcgagccttcactggtcgtttcctttgtaacatg
accttcctgaaggagtacatggaggaggaaatccccaaaaactatagcattgcacagaaa
cgagcactcttcttccgctttgtcgattttaatgacccaaactttggagatgagctcaaa
gctaaggttctccaacatatcctgaaccctgccttcctatatagctttgaaaaaaatgac
ggggagcagctattggggccacctaatcctgaaggcgataaccccgaaagtatcaccagc
gtttttatcaccaaggttctagaccccgagaagcaaaatgacatgctggattccctgcgc
atttacttgctgcagttttcaaccctacttgttgaacatgcaccgcaccacattcatgac
aacaacaagaaccgcaacagcaaactccgccaattaatgacctttgcctggccctgcctg
ctctccaaggcttgtgtggatcctgcttgcaagtacagtggccatttactcttggcacat
ataattgcaaaatttgccatccataagaaaatagtcctacaggtttttcacagtctgtta
aaagctcatgcaatggaggctcgggcaattgtccgacaagctatggcgattttaacacct
gcagtacctgctagaatggaagatgggcatcaaatgctgactcactggacaagaaaaatc
atagtggaagaaggccatacagtgccacagcttgtccatatcttacacttgatagtgcaa
catttcagggtttactatcctgtgaggcaccatttggtgcagcacatggtgagtgccatg
cagagattgggattcactcccagcgtcacaattgaacagaggaaattagcagtggaccta
gctgaagttgtgactaaatgggaactgcagcgaatccaggatcagccggagtccgatatg
gatccaaatagcagtggagaaggaactagttcagcctctagctctgtgaagaggggattg
tcaatggattcaggccaagatgtgaaacgcttcagaacggccacgggggccgtgagtatg
gtttttggaaggagccagtctctgccaggagctgatgcattgctttccaagcccattgac
aaacagcataccgacactgtagtcaatttcctgatcagaatagcctgtcaggtaaatgat
agctccaatactgcaggctctccgggagaggtactgtcccgtcgttgtgttaatctcctg
aagacagctctacgccctgacatgtggcccaaatcggaactcaaactgcagtggtttgac
aagttgctgatgactgtggaacagcccactcaagccaactttgccaacatctgcacgggt
ctagaggtactgagtttcctgttgacggtgcttcaatctccagccatccttgctagcttc
aaacccttacagcgggggatagcagcatgtatgacttgtggaaacaccaaggtgttgcga
gctgtgcataccctgttgtcccgtttaatgagcatcttccctactgaacctagtacttca
agtgttgcatcaaaatacgaagagttggattgcctgtatgcagcagttgggaaagttatt
tatgaaggacttaacaattatgagaaggctgctaatgctaattcaactcagctgtttggc
actttaatgatcctcaagtcttcatgcaccaacaaccccagttacatcgacagactgatt
tcagtgtttatgcgctcacttcagaagatggtgagggaccacttgagcccacaaacagca
cctggaggagctgaaaccaacacagctgccaccagcgagctggtgatgttgagtctggat
cttgtgaagacacggcttgctgtgatgagcatggaaatgaggaagaactttatccaagtt
atcctgacttccctcattgagaagtccactgacgctaaaatccttcgagctgtggtgaaa
atagttgaagaatgggtgaaaaacagctctcccatggcagccaatcaaacgcctacactc
agggagaagtccattctgctggtgaaaatgatgacctacattgaaaagcgctttccagaa
gaccttgaattaaatgcccagtttttagacctcgttaactatgtctatagggatgaaaat
ctttctggcagtgagctaacagcaaaactggagccagccttcctgtcaggactccgctgc
tcacaaccacagatccgagccaagttctttgaggtgtttgacaactccatgaagcaccgt
gtctatgagcgcctgctctacgtaacttgctctcaaaactgggaggcaatgggaaaccat
ttttggattaaacagtgcattgagctgttgttggctgtatgtgagaggagcaccacaatt
ggtacaagctgtcagggtgccatgcttccttccatcactaacgttataaatctagcagac
agtcatgatcgggctgcctttgccatggtaacccatgtcaagcaggagccacgagagaga
gagaacagcgagaccaaggaagaggaggttgagattgacattgaactggctccaggggat
cagagcagcacaccgaaaaccaaagaacaggctgaaaaggataccggaaaccaactgcat
atgctgaccaacagacatgacaaatttctggactctcttcgtgaagtaaagactggagcc
ctgctgagtgcttttgttcagctctgccatatttccaccccattagcggaaaagacctgg
atccagcttttctcaaggctgtggaagatactgtcagacagacagcaacatgccctggct
ggtgaagttagccctttcctatgtagtggtagccatcagatgcagcgagactgccaacca
agtgctctgaactgctttgtagaggcgatgtctcagtgtgtgcctcccattcccatcagg
ccatgtgtgctaaagtaccttggaaagacacacaacctctggtttcggtccacattgatg
ctggaacatcaagcttttgaaaaaggtctgagtctccaaatcaaaccaaaacagacaact
gagttttatgagcaggagagcataacccccccacagcaagaaattctggattcccttgct
gagctatactcactgttacaagaggaggatatgtgggcaggcttgtggcagaagcgctgt
aaattccctgaatctgcaacagctattgcctatgagcaacatggtttctttgaacaggct
caagaaacctatgaaaaggcaatggaaaaagcaagaaaagaacatgaaagaaataatgca
tcccctgctatctttcctgagtatcagctgtgggaagatcactggattcgctgttccaag
gagctgaaccagtgggaagctttaactgagtatggtcagtccaagggccatatcaatcct
taccttgtattagaatgtgcctggagagtatcgaactgggcagccatgaaggaggcattg
gtgcaggtaaagaagctaatcttttctgtgacagaatag
DBGET
integrated database retrieval system
