Latimeria chalumnae (coelacanth): 102365212 Help Entry 102365212         CDS       T02913                                  Symbol POLR2B Name (RefSeq) RNA polymerase II subunit B   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03020   RNA polymerase lcm03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     102365212 (POLR2B)   09124 Replication and repair    03420 Nucleotide excision repair     102365212 (POLR2B)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lcm03021]     102365212 (POLR2B)    03400 DNA repair and recombination proteins [BR:lcm03400]     102365212 (POLR2B) Enzymes [BR:lcm01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      102365212 (POLR2B) Transcription machinery [BR:lcm03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      102365212 (POLR2B) DNA repair and recombination proteins [BR:lcm03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       102365212 (POLR2B) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  102365212 NCBI-ProteinID:  XP_006011905 Ensembl:  ENSLACG00000002956 UniProt:  H3A0Y3 LinkDB All DBs Position Un AA seq 1176 aa AA seqDB search MYEPEAEEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRI VEDAPPIDLQAEAQHTSGEVEEPPRFLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNL TYSAPLYVDITKTVIKEGDEQAQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECP LDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVS MLARGGQGVKKSAIGQRIVATLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMM EMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEVLPHVGVSDFCE TKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIY AQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFAST LSHLRRLNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQP SPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPDQLMNTLRKLRRQMDIIV SEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVA SGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQ SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINS IVAIASYTGYNQEDSIIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPSRDTCQ GMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRT SETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC EGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSEY GYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPLQILNRQPMEGR SRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMGIANTRTHTYECR GCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMAV NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atgtacgagcccgaggcagaagaagatatgcagtatgatgaagacgatgatgaaatcact ccagatttatggcaggaagcatgttggattgtcattagctcctactttgatgagaagggt ttggtgcgacagcagttagactcatttgatgagttcattcagatgtctgtgcagcgaatt gttgaggatgcccctccaatagatctacaagctgaagctcagcatacctcaggagaggtt gaagaaccgcctcggttcctgttgaagtttgaacagatatatctctccaagccaacacac tgggaaagagatggtgcaccttcgccaatgatgccaaatgaagctagactccgaaatctt acgtactcagcacctctttatgtagatatcactaaaactgtaataaaagagggcgatgaa caggctcaaacacagcatcaaaagacatttataggaaaaattcctatcatgcttcgctct acctactgccttttgaacggtctgactgatcgtgatctctgtgagctgaatgaatgtcca ctggatccaggtggttattttattatcaatgggtccgaaaaggttctgatcgctcaagaa aagatggccacaaacacagtgtatgtgtttgcaaagaaggactcaaagtatgcatataca gcagagtgtcgctcgtgcttagagaattcctctcgcccaacaagtactatatgggtcagc atgcttgcaagaggtggacagggtgtgaaaaaaagcgctattggtcagcgtattgtagcc acgttaccatacataaggcaagaagtacccattattattgttttccgggctcttggattt gtatccgacagggacattttagaacacattatttacgactttgatgacccagagatgatg gaaatggttaaaccttcgctggatgaagcttttgttatccaggagcagaatgttgcactt aacttcataggttcaagaggtgctaaaccaggtgtcacaaaagagaaaagaattaagtac gcaaaggaagtattgcagaaagaggtgcttccacatgtaggcgtcagtgatttctgtgag accaagaaggcatattttttaggatacatggttcacaggctgcttctggctgcattaggt agaagagaacttgacgacagggatcactatggaaataagaggcttgaccttgctggacct ttacttgcttttctgtttagaggaatgtttaagaatctactcaaagaaataagaatatat gcacagaagttcatcgatcgagggaaggattttaatttggaactggccattaagacacga ataatttctgatgggctgaaatattctctggcaactgggaactggggtgaccaaaagaaa gctcaccaagctagagccggagtgtctcaagtgttgaaccgtctgacttttgcatctact ctttctcatttacgtcgcctcaactctcccatcgggcgagatggcaaactggcaaaaccc agacagctacacaacacattgtggggaatgatttgtcctgctgagactccagagggacat gctgtaggccttgtaaagaacttggctctaatggcctacatttctgttgggtctcagcca tcaccaattttggagttcttagaagagtggagcatggaaaacttggaagaaatctctcct gcagccattgcagatgccacaaagatttttgtcaatggttgttgggttggaatacacaag gatccagaccagcttatgaacaccttaagaaaactccgacgtcagatggacattattgtg tcagaggtgtctatgatcagggatataagagaacgtgaaatccgtatctacacagatgca gggagaatctgtcgaccgctcttaatcgtggaaaagcagaagctgctgcttaagaggagg cacattgatcagttgaaggaacgagagtacaacaactacagttggcaggatcttgtggct agtggtgtagttgaatatatcgatactcttgaagaggagactgtgatgttagccatgact ccagatgacctgcaggaaaaaggagttgcctattgttcaacttatacacattgcgagatt catccttccatgatccttggagtttgtgcatctatcatccccttccctgatcataaccag tcccccagaaacacctaccagtcagctatggggaaacaagccatgggggtttacatcaca aatttccatgtacgaatggacacattggcacatgtgttgtactatccacagaagccacta gtaaccacacgttccatggagtatctgcgatttcgagagcttccagcaggtatcaactct attgtggcaattgcctcatacactggatacaatcaagaagactctatcattatgaatcgt tcagcagttgacagaggctttttcaggtctgtgttctatcgttcctacaaagaacaggaa tccaagaaaggctttgaccaggaagaagtttttgagaagccttcccgagatacctgtcaa ggtatgaggcatgccatctatgacaaactagatgatgatggcttaatagcgcctggtgta cgtgtttctggggatgatgtcatcatcggcaagacagtgactttgcctgaaaatgaggat gagcttgaaagcacaaaccggcgttacacaaaacgtgactgtagcactttcctccgaact agtgagactggtattgtagatcaggtcatggtgacacttaaccaagaaggatataagttc tgcaaaattagggtgcgctctgttagaatcccacaaattggagacaaatttgccagtcga catggccagaagggtacttgtggtatccagtacaggcaagaagacatgccttttacttgt gaaggtatcaccccagatatcatcattaaccctcatgccatcccatctcgaatgacaatt ggtcacttgattgaatgtcttcaagggaaggtatcggcaaataagggtgaaattggagat gctacgccttttaatgatgctgtcaatgtacaaaagatttccaatctgctttctgagtat ggttatcatcttagaggaaatgaggtcctctacaatgggtttacaggtcggaaaattacc tcacagatcttcatcggtccaacttactatcagcgcttgaaacacatggtggatgacaaa attcattcccgtgccaggggaccacttcagatccttaacaggcaacccatggagggtaga tctcgtgatggtggcctccgttttggtgaaatggagagagactgccagattgctcacggt gcagcacagtttttgagagagagattgtttgaagcatctgatccataccaagttcacgtt tgcaatctctgtggattaatgggtatagcaaacaccaggacacacacatatgagtgcagg gggtgccgaaataagacacagatttctttggtcagaatgccttatgcctgcaaacttctc ttccaagaactgatgtccatgagcattgcacctcgtatgatggctgtctga

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