Larimichthys crocea (large yellow croaker): 104924494
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Entry
104924494 CDS
T04659
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104924494 (sec16a)
Membrane trafficking [BR:
lco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104924494 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
104924494
NCBI-ProteinID:
XP_010736158
LinkDB
All DBs
Position
IX:2573359..2590816
Genome browser
AA seq
2383 aa
AA seq
DB search
MQPPPRTGPPGASGPPPSGPNMFRRTRPHKYTAAAAAAAAMPPTAQPMTDPFAFARASPP
VAAGGLPTIPNSNPPPMQAPPNSMYAQAGSGLPPQPHTMEDVPAAPLGPPPSSLPGVTLF
NPHSAASPGVFHAPSPAGYASSSHSEPGYFNSREQMPSVATEPPHVASAPTPFNQGQPPP
QPVPFQPVPPTTSSSQWAPDHGSRPPSVQNYFQPTSDPPPQPFNLPPQAQMYPSHTPSPH
HGTPTPPTQPGHSQIQAPLPLPLQNPARPPSSQWPDPNPPQHHNSHFQTPSYFSQTSAPQ
DSWFNQPPPDSGYHQMGTGLGHPQPRPESAGSQHASNTGPGPSSASAAVPYSQESGTLSM
FFKDNDVENEETLAGERNKAVNGSPGSFQHYSNPQAHVGHADVSLDYQGPPLQDHSHLPY
MNDGSHAAQAIAQKPPDSHYDHVENLECVPNQEVLPHDTHGSPAAAAATAHGVDPYETGP
NLETPDSIPRPMRSASVSSNYSNMSHGSATGTRRHQGVVGTFIQQESPRLTDEANLSAVA
GGYFEQIDTSPAGDMGSAQQSSLEQMWPPTPSPPKPTGIFQASANSSFEPVRSHGVGVRP
PEVDRAKMVAEGGADSTPGNLEQPPDNMENIYGPGHPLPAVAGGGVPHLTHPVVLSHSRP
SSRAFGANRPCESPATTLWAQSDPASLGANILLAPAAPTVLAPLREPSADVIQPPEDGPL
DLQPPQRMQPTSQQPLENLENPPKVSEAEPADSQGNLGYASLLVADSLHQPVLIAPPVSN
YSVIPPSTPAQAAGQSSLRESTPLVRSLSQGQGASMSQPPPVTSNQNPLFVPGPISFSTS
VSNQGPLNLTRDNAEAATSDIAAPPQSQPLRPPLSRGQSVVGDSHSALQVNPPASLVTAP
VSNHNQPSNYELLDFSMHQSQAQNQASGHPSSLHESPQSSNGFYLQVTKDAQQGLRAKGN
APVQTPAPSSTPQVPPTPSQPAANTQPPPPAEPPKMSDSQAALQEQNVAPPPGLMSGAQL
SHGQYLPPAPGSTAGSAPPPPPTTAAAAAYPPGPRGPVPPGASQQAPAEPPRPPSSAGSQ
QGYGPPPPPGQMYGGYYGNYGEYPDGRAPYPPGQYPPPPGDPRAQQYYQDGSYRRDPWYG
RYEGQNQAYRDPNYQYREPQPERPSSRTSQYSDRPSSRQGYPDDYQRANRSAYSDYYADY
AKHYDYAGYYGQYDPRYRGYYDQSYWANYNDSYRGRDNYYNQMYPPRKEGYEDQWQYYPG
YDASFDDDYRRRGDAYGDDFDRRSVHSEQSAHSVHSSHSHHSRRSSFSSRSQQSQVYRSQ
PDLTAVYDTTASTLAVDYSYGQYPNQTDVSQNYSQYHYPSEYTADSTWITPEQPPPRPAT
PEKFSMPHRCARFGPGGHLVQVLPNLPSAGQPALVDIYNLETMLQDTPDQTELRAFPGPL
VKEETHKVDVIKFSQNKALECSRDNNLLDRDSARLLWDFIMLLCRQNGTVVGTDIADLLL
KEHRSVWLPGKSPNEANLIDFNNEPLARAEEEPGAGPLSLLSDTFMTVPENVGKETERFR
ELLLFGRKKDALEAAMKGGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQTVYQLM
SGRMPASATCCGEEKWGDWRPHLAMVLSNLTHTLDLDTRTITTMGDTLASKGLIDAAHFC
YLMAQVGLGVFTKKSTKMVLLGSNHSLPFYQFATNEAIQRTEAYEYAQSLGSQPCSLPNF
QVFKLIYACRLAEAGLSAQAFHYCEVISRTVLMQPAYYSPVFISQIIQMSEKLRFFDPQL
KEKPEQELFDEPEWLLHLRQLDGQIRTGIITYNENRATPTQYDCSSPSSDLDHPSPPEPY
NMPVELDGPTPDNPLMSSLLPGPPPQGVQLMPPAPTSILQDGMAHHQPLPSNDVPQFYPV
PPSGQPGQIPLSGYPPQDPGFAPPPFQPQPEQSEMYPGANQQQQCPPPHQVDQMSPHMPP
QVPHSPVQMNPPPPQMQQQQQQHHHHHMPPSPGHMPHVEQQPHTPTEMHIGQPISSSPPR
RSFTPAQMDFYDKMAYMGPGRRSRTTSQSSMHMPSGRRSRTTSESSTHSGGRERSNSAIK
QVSPPPPSIPEQPRKEEAKKVKKDSPKKGGGGGGGWLNWLYRRGQNEAHLPDDKNKSIVW
DEQKQKWVDLNEPEEESKPPPPPPSGFPMMPQMPGPGGPAAPPSSSGGPPVNMFSRKAGT
RSRYVDVLNPSRTAKLGGLAPAPADIFAPLAPMPMPANLFVPSSAPDDQQPLEGSEGGNL
EQNSPNTSTAPQMFNPTLLPPAPEGPPVPDGSQSGELSRSSSMSSLSREVSQHLNQSHPA
QGAAPAGGVTFYNPAQFAQTSAPSGGGHRVGRLGGQRQYPVLK
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcgaactggacctccaggagcctctggcccgcctccctccgggcct
aatatgttccgcaggaccaggcctcacaagtacacagcagcggctgctgctgccgccgcg
atgcctcccactgctcaacccatgacagaccccttcgcttttgctagagcttctccaccc
gtggctgcaggtggtctcccgacaatacctaacagcaaccctccaccaatgcaagccccg
cctaactccatgtacgctcaagctggctcagggctgcctccgcaaccacataccatggag
gatgtcccagctgctccccttggccccccgccgtcgtctctgccaggggtgaccctgttc
aaccctcacagcgcagcatccccgggtgttttccacgcacccagccctgcagggtatgca
tcctcctcgcatagtgaaccgggctattttaattcaagagaacagatgccatcagtggcc
acggagccaccacatgtggcctcagcccctacaccttttaaccaaggacagcctcctcct
cagccggtgcccttccagcctgtgcctcccaccacctcctcttcccagtgggcccccgat
catggaagtcgtcctccatcagttcagaactatttccagcctacgagtgaccctccacca
cagccttttaatttacctccgcaggcccaaatgtacccctcccacaccccgtcacctcat
cacggcacccccacacctccaacacaacctggacattcccagatccaggctcctcttcct
cttcctctccagaatcctgcaaggccccctagttctcagtggcctgacccaaatccaccc
caacatcacaattcccacttccaaactccgagctacttcagtcagacttctgcgccccag
gactcgtggttcaaccaacctccaccggactcgggctaccaccaaatggggacaggcctg
ggccaccctcagcctcggcctgaatctgctggatctcaacatgcgtccaacaccgggcct
gggcctagttctgcctctgccgcagtcccatactctcaggagtctggtacactctcaatg
ttctttaaagacaatgatgtggaaaatgaagaaacactggctggagagagaaataaggca
gtgaacggtagtcctggatcctttcagcattacagcaacccgcaagcccacgttggccat
gcagacgtttcactggattaccaaggacctcctctgcaagatcattcacacctaccatac
atgaatgacggcagccatgcagcacaggctatagcccagaagcccccagattcccactac
gaccacgtggagaatttggagtgtgtcccgaaccaggaggtattaccccatgacacccac
ggcagccctgctgccgccgccgccacagcccacggagttgacccatatgaaaccgggcct
aacctggagactccagattctattcctaggccaatgagatccgccagcgtgtcatccaac
tatagcaatatgagccacggaagcgcgaccggcactcgtcggcatcagggagtagtaggc
acctttattcagcaggaaagtccacgtctcaccgacgaagccaacctctctgccgtcgct
ggaggctactttgagcagattgacacttctcccgctggagacatggggagcgcacagcag
agctccctggagcagatgtggcctcccacgcctagccctcccaaaccaaccggtatcttt
caggccagcgccaacagctcgtttgaaccggtgcgctcgcatggggtcggggtgcgtcct
cctgaagtcgatagggctaaaatggtagcggaaggcggtgcagattcgacacctggaaac
ctggagcagccaccggataatatggaaaatatttatggaccgggtcaccccttgcctgct
gtggctggaggcggtgtgccccatttgacacaccctgtggttctctctcactctcgacct
tcatcccgcgcttttggagccaatcggccctgtgagagccccgccaccactctgtgggct
cagagcgatcccgcaagcttgggcgctaacatcctcctagcccccgccgccccgacagtt
ctcgcccctttacgtgagcccagcgccgacgtcatccagcctccggaggacggcccgctg
gacctgcagccccctcagcgaatgcagccgacttcacagcaaccattagagaacctagag
aacccaccaaaggtgagtgaggcagagccagctgactctcaaggcaacctgggctatgcg
tctctccttgtggccgactcgcttcaccagcctgttttgattgccccgccggtgtccaat
tacagtgtgattccccccagcacccccgctcaagctgccggtcaaagtagccttagagaa
tctaccccactcgtgagatcactctcacaggggcagggtgccagtatgtcccaaccccct
ccagtaacctctaatcagaatccactgtttgtccctggaccaataagcttcagtacttca
gtgtctaatcagggtccgctcaatctgacccgagacaacgctgaagcggcaacatccgac
atcgcagctccgccacagtctcagccgctccgccctcctctctccaggggtcaatcagtg
gttggagacagccactctgctctccaagttaatccgccagcttctcttgtgactgctcct
gtctctaatcataatcagccatcaaattatgaactgcttgatttttctatgcaccaatca
caagcccaaaaccaagcctctggccatccttcctctctgcacgagtctccgcagtctagt
aacggattttacctacaggtcaccaaagatgctcagcaggggttaagagcaaaaggtaat
gcccctgtccagaccccagccccctcatctaccccgcaggtaccaccaacaccctcccaa
ccagctgcaaacacccagccaccgccgccagccgagcctcctaagatgtcagattctcag
gctgcactgcaggaacaaaacgttgctcctcctcctggtttgatgagtggagcgcaactc
tcccacggccagtatctgcctccagcaccggggtctactgcaggaagcgctcctcctcct
cctcctactactgctgctgctgctgcataccctccaggacctcgaggaccagtacctcct
ggagcttcccagcaagctcctgcagagccaccacgaccaccctcctctgcaggcagccag
caaggttacgggcctcctcctcctccagggcagatgtatggtggttattatggtaattac
ggagaataccctgatggcagagcaccttaccctcctggccagtacccacctccacctggg
gatcctagagcgcagcagtattaccaagatggttcatacaggagagatccttggtatggc
agatacgaagggcagaaccaagcttatcgtgatccaaactaccagtacagagagcctcag
ccagagcgacccagctccaggaccagtcaatactctgacaggccttcatccaggcaaggc
tatcctgacgattaccagagagcgaaccgaagtgcctatagtgattattatgcagattac
gccaagcactatgattatgcaggatactacggacagtatgacccgcgatacagaggatac
tatgatcagtcctactgggctaattacaatgacagctacagaggcagagacaactactat
aatcagatgtatccacccaggaaagagggctacgaggatcagtggcagtactatcctggc
tacgacgccagtttcgacgacgattaccgccgccgcggggatgcgtacggcgacgacttc
gaccgacgcagcgtccacagcgagcagtcggcgcacagcgtgcacagctcccacagccac
cacagcagacggagcagcttcagctcgcggtctcagcagagccaggtatacagaagccag
cctgacttgacggcagtctacgacaccacagcgtccactttggctgtggactactcgtat
ggacagtacccaaaccagaccgatgtctcccagaactacagccagtaccactatccctct
gagtacacagcagacagtacctggatcaccccggagcaacctccacctcgtcctgcaacc
ccagagaagttctccatgccccaccgttgtgcccgctttggccctggtggtcatctggtt
caggttctgcccaatctaccttcagctggacagcctgctctcgttgatatctacaacttg
gagaccatgctgcaggacaccccggatcagacagaactacgagccttccctggacctctt
gttaaggaggagacccataaggtggatgtgataaagttctcccagaacaaagcgctcgag
tgttctcgtgacaacaacctcttggacagagactctgcccgtctgctctgggacttcatt
atgctgctctgcagacagaacgggactgtggtcggcacggacatcgctgacctcttgctg
aaggagcaccgctccgtctggctgccggggaaaagtcccaacgaagccaacttgattgat
tttaacaacgaacctctggcacgagctgaggaagagccgggagccgggccgctgtccctc
ctgtctgacaccttcatgaccgtgccggagaacgtgggcaaggaaactgaacgcttcagg
gagctgctgctgtttggccgcaagaaggatgcgctagaagcagccatgaaaggaggtctg
tggggccacgccctgctgttagccagtaaaatggacaataggacgcatgcacgtgtcatg
acaaggtttgcgaacagtttgcccatcaatgaccctctgcagacggtgtaccagctcatg
tcagggaggatgcctgcatcagccacttgctgcggagaggagaagtggggcgactggcgc
cctcatctggccatggtgctgtccaacctcacgcacactctggacctggatactcgcacg
atcaccaccatgggtgacactctcgcttccaaggggctgattgacgctgcgcacttttgc
tacctgatggcccaagttggtctgggagttttcacaaagaagagcaccaagatggttctg
ctcggctccaaccatagtttgcccttctaccaatttgcgaccaatgaagcaatccagagg
accgaggcctacgagtatgctcagtctctgggctcccagccgtgctctctaccaaatttc
caggtcttcaagttgatctatgcatgccgcttggctgaagcaggcctcagtgctcaagcc
ttccactactgtgaagttatctctaggactgtcctcatgcagcccgcctactactctcct
gttttcataagccaaatcatccagatgtctgaaaagctgcgattctttgatccacaactg
aaagagaagccggagcaggagttgttcgacgagcccgaatggctgcttcacctcagacag
ctggatggacagatcaggacgggcatcattacgtacaacgaaaacagagcaactcccaca
cagtacgactgcagcagccccagctctgacttggaccatcccagtccacctgaaccttac
aacatgcctgtggagttggacggccccacgcccgacaacccactaatgagctcgttactg
cccgggcctccaccacagggagtacagctgatgcctccagctcccacctccatcctccaa
gatggcatggcccatcatcagcctctaccctccaacgatgtgccccagttctacccagta
cccccaagtggacaaccaggccagatccccctctcaggctaccctccgcaggatcctggc
ttcgcccctcctccgttccagcctcaacccgagcagtcagaaatgtatccaggagccaat
cagcagcagcagtgtcctccgcctcaccaagtggaccaaatgtcaccacacatgccccct
caggtgccgcattcacctgtacagatgaatcccccgccaccccagatgcagcaacagcag
cagcagcaccaccaccaccacatgcctccttctcctgggcatatgccacatgtagagcag
caaccccacaccccaacagagatgcacattggtcaaccgatatcatcctccccacccaga
agatccttcacacctgcgcagatggacttctatgacaaaatggcttacatgggtcctggg
aggagatcgaggactacttcacaatcttcaatgcatatgccttcaggacgtcgctctcgc
accacctctgaatcttccactcactccggcggaagagagcggagcaactcggccatcaag
caggtgtctccacctccgccgtcgattcctgaacagccacgcaaagaagaggctaagaaa
gtcaagaaagactccccgaaaaagggtggtggtggtggtggtggctggctaaactggctc
tataggaggggacagaatgaggctcacttgccagatgacaaaaacaaatcaatcgtgtgg
gatgaacagaagcagaagtgggtcgacttgaacgagccagaagaggagagtaagccccct
ccaccgcctccctctggcttccccatgatgcctcagatgcctggccctggagggcccgct
gcacccccaagtagtagtggtggtcctcctgtcaacatgttctccaggaaagcaggcacg
aggagcagatacgtggatgttctgaaccccagtagaactgctaaactgggcggattagct
cccgctcctgctgacatctttgctcctttggcaccaatgcccatgcccgcaaacctattt
gtgcctagttcagcgcctgacgatcaacaacctctagagggcagtgaaggagggaatctg
gaacagaattcaccaaacaccagcactgctccacagatgttcaacccaacgttgttacca
cctgcaccagagggacctcccgtgcctgacggctcacagtccggagagctctcacgttct
agctcaatgagttctttatcacgcgaagtgagtcagcatttaaaccagagtcatcccgcc
cagggagctgcacctgctgggggcgtcaccttttataaccctgcacagtttgcacagaca
agtgcaccatcaggaggggggcaccgcgtcgggcgtttgggcggtcagcgccagtaccca
gtgttgaagtaa
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integrated database retrieval system
