Larimichthys crocea (large yellow croaker): 104936022
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Entry
104936022 CDS
T04659
Name
(RefSeq) filamin-B isoform X1
KO
K27392
filamin-B
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104936022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104936022
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104936022
Intermediate filaments
Intermediate filament-binding proteins
104936022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Big_3_5
CH
Y_Y_Y
DUF5060
CFSR
Motif
Other DBs
NCBI-GeneID:
104936022
NCBI-ProteinID:
XP_027134627
LinkDB
All DBs
Position
VI:19471759..19533398
Genome browser
AA seq
2613 aa
AA seq
DB search
MPVTEKDLAEDAPWKKIQQNTFTRWINEHLKCVNKRIADLQLDLGDGLRLIALLEVLSHK
KMYRKYHPRPNFRQMKLENVSVALEFLDKENIKLVSIDSKAIVDGNLKLILGLVWTLILH
YSISMPVWEGEDEEAESKTPKQRLLGWIQHKVPDMPINNFSQDWRNGKALGALVDSCAPG
LCPDWETWDPVKPVENATEAMKLADDWLGVPQVIAPEEIIDPSVDEQSVMTYLSQFPKAK
LKPGAPLKPKLNPKKARAYGPGIEPTGNRVKRPAVFTVDAFSAGQGQVTVYLDHPDGTRE
ELKAEPNEGKKTFSVTYIPQVIGAHKVTVLFAGQQIPKSPFEVSVDKALGDATKVTVKGP
GIEPVGNIANKPTYFDIFTAGAGTGDVTAMIRDPQGRQNSVEVMMEDKGDSVYRCTYRPT
QAGPHMVTVTFGGVGIPKSPFSVDVGPACMPGACRATGRGLQPVGLRVKQVGDFKVDTKN
AGSGDLKVLVKGPKGVEEPVKQISGQDGVFFYEYYPNSPGKYTVSITWGGQNIPKSPFEV
VVGREAGPQQIRAWGPGLEGGIVGKPAAFVVESVGTDVGVLGFAIEGPSQAKIECEDQND
GSCDVRYWPTEPGEYAVHVTCDEEDIEHSPFMAHIVPDNNSSDANEVQAYGPGLEKTGCL
VNQIAEFTVNAKDAGKGPLKIMAQDAEGLPVEVKVRSKGDGLYACSYTATSPLKHTLAIT
WGGVSIPNSPYRVNVGKGSHPNLVKVFGPGVERTGLKANEPTHFTVDCSGAGDGDVSVGI
KCDANMVGDKEADVDFDIIPNANDTFTVKYMPPAAGRLTVKVLFTDKEVPQSPFHVKVDP
SHDASKVKAEGPGLARTGIECGKPTHFTVLTKGAGKAPLDVSFSTPVKDFDIIDNYDYSQ
TVKYTPAQQGEVTIVVKFGGDPIAKSPFKVGVAAPLDLNKVTLDDLEGRVEVDQEQQFMV
DTKGAGGQGHLEVAVLSPSQRAVPCKVEPSKAGISLVRYTPTEEGVHAVNVSYDGHPVPG
SPFPVEAQLPPDPSKVKAFGPGLKGGLVGNPAEFTIDTKGAGTGGLGLTVEGPTEAKIEC
SDNGDGTCSVSYLPTEPGDYLVNILFEEVHIPGSPFKADVQMPFDPSKVVASGSGLKRGK
VGETSVVNVDCSRAGPGELSLEAALDSPPTSPTGAAPVSGVKAKTEVVNNKDGTYTVTYI
PLTSGMYTLLLKYGGKAVPGFPAKVMVDPAVDTSKVKVFGPGVEGQAVFREATTAFTVDA
RPLTRRGGDHVKAEVKNPSGALTDCLVTDNGDGTYNIEYTPFENGVHSVQVLYDDTPVPK
SPFRVSVSEGCDPSRVVATGPGLQQALTDKPNNFDIITRGAGIGGLGITVEGPSESKMSC
KDNKDGSCSVEYVPFTPGLYDVNITYGGEHIPGSPFKVPVKDMVDSSKVKVSGPGVGSGV
RANIPQSFTVDCRKAGVAPLAVAITAPKGIAEPMEVTDNGDGTHLVSYTPSVEGPYSVAV
KYAEEDVPRSPFKFRVLPTHDASKVRASGPGLTNGVPASFPVEFNIDAKDAGQGQLSVLI
TDQDGKPKQPTIHDNGDGTYRVSYIPDRAGRYTIVIKYGGDDIPASPYKVRATATGDASK
CTVTGPGVGPTVAIGEEVGLVVNAKGAGKGKVSCVVVQPDGSEVEAQVLENEDGTFDIFY
TAPAPGNYVIYVRFGGENIPRSPFKVMATDEVPMMQEQRSLQQQAGPPGAGFQPWVTSDS
YEPISSSVNGSGFRPFDMVIPFAFRKGEITGEVLMPSGKSAQPLISDNLDGTVTVQYSPT
EAGLHEMHIKYNGTHIPESPLQFYVNHASSPNVTAYGPGLSYGVANKLATFTVFTEDASE
GGLDLAIEGPSKAEISCMDNKDGTCSVSYLPTLPGDYNILVKYNDDHIAGSPFTARITQD
NQRRSQVKLGSAADFSLNINETDLSLLTASIQSPSGRDEPCLLKRMANNHIGISFIPREV
GEHRVSIFKNGRHVANSPITIMVVQSEIGDASQVKAHGDGLVQGTTFNNSSFVVDTREAG
YGGLALSIEGPSKVDIQTDDIEDGTCRVTYCPTEPGNYIVSIRFAEEHVPGSPFTVRVTG
EGRIRESITRRQKAASVSSVGSVCDLSLKIPAIDIQDVTAEVTSPSGVSQPAELVAVGND
TYCVRFVPTEMGVHSVSVRYRGVHVPGSPFQFTVGPLGEGGAAKVRAGGPGLEGAQAGEP
AEFSIWTREAGAGGLAIAVEGPSRAEISFDDRKDGSCGVSYIAQEPGDYEISVKFNDQHI
PDSPYLVPVVAPANDARRLAVTGLQESGLKVNHPASFAVRLNGAQGKMAAKVHSPSGALE
ECVVTELERDKYAVRFIPRENGVHSIDVKFNGSHIPGSPFQVRVGEPGQTGDPGLVSAYG
AGLERGTTGTQSEFIINNTKAGPGALAVTIEGPSKVKMDCQEVPEGYKVQYTPMAPGNYL
ISIKYGGPNHITGSPFKAKVTGSRLVHVTNASETSTLTVDPAVRASSSSFTQSAMSRLTD
SDASKVLSRGPGLSKAFVGQRSNFSVDCSKAGKNMLLVGVHGPQVPCEEVLVKHLGNLQY
NVSYLLKERGNYILVVKWGDDHIPGSPFHVVVP
NT seq
7842 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcacagagaaggacctggcggaggacgctccgtggaagaagatccagcagaac
accttcacccgctggatcaacgagcacctgaagtgcgtcaacaagcggatcgcggacctg
cagcttgacctgggcgatggcctgaggctcatagctctgctggaggtcctcagccacaag
aagatgtacagaaagtaccacccgaggcccaacttcaggcagatgaagctggagaacgtg
tccgtggctctggagttcctggacaaagagaacatcaagctggtctccatagactctaaa
gccattgtggatgggaacctaaagctgatcctgggtctggtctggactcttatcttgcac
tattccatctccatgccagtctgggagggcgaggatgaagaggcggagtcaaagacacct
aagcagcgtctgctgggctggattcaacacaaagttcccgatatgccaatcaacaacttc
agccaggactggaggaacggcaaggcgctgggagcgctggtcgacagctgcgcaccgggc
ctgtgtccagactgggagacctgggatccagtgaaaccagtggagaacgccactgaggcc
atgaagctggctgacgactggctgggcgtcccgcaggtgatcgctccagaggagatcatt
gatcccagcgtggacgaacagtcggtgatgacttacctgtctcagttccccaaagccaaa
ctgaagccaggagctccactcaaacccaaactcaaccccaagaaggcccgtgcatacgga
ccaggtatcgaaccgacggggaacagggtgaagcgtcccgctgtgttcacagtggacgcg
ttcagcgccggtcagggtcaggtcaccgtctacctggatcatccggacggcaccagagag
gagctgaaggcagagcctaacgagggcaagaagacgttcagcgtcacctacattcctcaa
gtgatcggagctcacaaggtgaccgtgttgtttgcaggccagcagattcccaaaagtcca
ttcgaggtgagcgtggacaaggcgctaggcgacgccaccaaggtcacggtcaaaggcccg
ggaatcgaacctgtgggcaacatcgccaacaaacccacctactttgacatcttcactgca
ggagccggtacaggagatgtgaccgccatgatcagagatcctcagggccgccagaacagc
gtggaggtgatgatggaggataaaggcgacagcgtgtatcgctgcacctaccggcccaca
caggccggcccgcacatggttactgtcaccttcggaggggtggggatccctaagagcccc
ttcagtgtggacgtggggcctgcctgcatgcccggggcgtgcagagcgacgggtcgtggt
ctccagcccgtaggactgagggtgaaacaggtcggagacttcaaggtggacaccaaaaac
gccggcagcggagacctgaaggtgctcgtcaaaggacccaagggagtcgaggagcccgtg
aagcagatctccggccaggacggcgtgttcttctacgagtattatcccaacagtcctggc
aaatacacagtctccatcacctggggaggtcagaacatcccgaagagcccgttcgaggtg
gtggtgggtcgggaggccgggcctcagcagatcagggcctggggtccgggcctggaagga
ggcatcgtgggtaaacctgctgcctttgtagtggagtctgtcggcactgatgttggagtg
ctgggttttgccattgagggaccttcccaggctaaaatcgagtgcgaggaccagaacgac
gggtcatgtgatgtccgctactggccgacggagcccggagaatacgccgtgcacgtgacc
tgtgatgaggaggacatcgagcacagccccttcatggcacacatcgtccctgacaacaac
tcaagtgacgcaaatgaggtccaggcttacgggccgggacttgagaagaccggctgcctc
gtcaaccagatcgctgagttcactgtcaacgctaaggatgctgggaaaggacctctgaag
atcatggctcaggacgcagagggtcttcctgtggaggtgaaggtgaggagtaaaggtgac
ggtctgtacgcctgctcctacacggcgacctcccctctcaaacacaccttggccatcacc
tggggaggagtcagcatccccaacagcccctacagggtgaatgtgggtaaaggcagccac
cccaacttggtgaaggtgttcggtcctggcgtggaaagaaccggattgaaggccaatgag
cccacacatttcactgtggactgttcaggagctggagatggtgatgtcagtgtgggcatt
aagtgtgatgccaatatggtcggcgacaaagaggctgacgtggactttgacatcatcccc
aacgccaacgacacgttcactgtcaaatacatgcctcctgcagcgggaagactcaccgtc
aaagtcctgtttacagacaaggaagttcctcagagcccctttcacgtcaaagtcgatcct
tcccacgatgcatcgaaggtcaaagcagagggtcctggactggctcgcactggtatagag
tgcggtaagccgactcatttcacggtgttgactaaaggagccggtaaagctccgctggat
gtttccttctcaacccccgtcaaagattttgacatcatcgacaactacgactactcccag
actgtcaaatacacacctgcacaacagggcgaggtgacgattgtggtaaagtttggagga
gatcccatcgctaagagtcccttcaaggtcggggtcgctgccccgttggatctgaacaaa
gtcaccctggacgacctggaaggaagagtggaggtcgatcaggagcagcagtttatggtg
gacaccaaaggtgcaggaggtcaaggtcacctggaagtggcagtgctgagtcccagccag
cgggcggtgccctgtaaagttgagcccagtaaagcaggcattagtctggtccgctacacc
cccacagaggagggggttcacgctgtcaatgtgtcctatgatggacaccccgtccctggg
agtcccttccctgtggaggcccagctgcctccagacccaagcaaggtgaaggcgttcggc
cctggtctgaagggaggtttggttggaaacccggccgagttcaccattgacaccaagggc
gccggcaccggaggtctggggctgactgtggaggggccgactgaggccaagatcgagtgt
tcggacaacggtgacgggacatgctccgtctcttacctgcctaccgagcccggagactac
ctggttaacatcctgtttgaggaggtccacatcccgggctcacctttcaaagctgacgtc
cagatgccttttgacccctctaaggtggtggcgtcgggatctggtctgaaaagaggcaag
gttggagagaccagtgtggtcaatgtggactgttcccgggccgggccaggagaactcagc
ctggaggctgcgctagattctcctccaaccagtccaactggtgctgcaccagtctctggt
gttaaagctaagacggaggtggtgaacaacaaagacgggacctacacggtgacctacata
ccgttgacctccggcatgtacacactgctgctgaagtacggaggcaaggccgtccccggt
ttccctgcaaaggtgatggtggatcctgccgtggacacctcgaaagtcaaagtgttcgga
cccggagtggagggacaagctgttttcagagaagccaccacagcgttcacagtggacgcc
cgtcctctgacccggcgaggaggagaccacgtgaaggctgaagtcaagaacccatccgga
gcgctgacagactgtctggttaccgacaacggcgatgggacctacaacatcgagtacact
cctttcgagaacggcgtccacagcgttcaggttctgtatgatgacacaccggttcctaag
agcccgttcagggtttctgtgtccgagggatgtgaccccagcagggtggtggctactggt
cccgggcttcagcaagctctcacagacaagcccaacaacttcgacatcatcaccagaggg
gcaggtattggcggtcttggcatcaccgtggagggtccgtccgagtcaaagatgtcctgc
aaagacaacaaagatggcagctgcagcgtggagtatgttcccttcacacccggcctctac
gacgtcaacatcacctacggaggagaacacatccccggaagtccattcaaggtcccggtg
aaggacatggtggactccagtaaggtcaaggtgtccggtcccggtgtgggttcaggagtc
agagccaatatcccacaatccttcacggtggactgcaggaaagcgggcgtggcccctctg
gccgtggccatcactgctcctaaaggcatcgcggagcccatggaggtgacggacaatgga
gacgggactcacttggtgtcctacacgccgtccgtagagggaccgtactctgtggctgtc
aagtacgcagaggaggacgtcccccgcagtcccttcaagtttcgtgtcctgccgactcac
gatgccagcaaagtgcgagccagcggccccgggctgaccaacggcgtccccgccagcttc
cccgtcgagttcaacatcgacgccaaggacgccggccagggccaactgagcgtgctcatc
accgaccaggatggtaaacctaagcagcccactatccatgacaacggggacggtacatac
cgggtttcttatatccccgaccgtgcaggccggtacaccatcgtcataaagtatggcggt
gacgacatccctgcctcgccttataaagtccgcgccacggcaactggagacgccagcaaa
tgcaccgtcactggtccaggtgtgggcccaacggtggccatcggcgaggaggtgggcctc
gtggtgaacgctaagggtgccgggaaggggaaggtgagctgcgtggtggttcagcccgac
ggcagcgaggtggaagcccaggtgctggagaacgaggacggcaccttcgacatcttctac
accgcgccggcacccgggaactacgtcatctacgtccgcttcggaggggagaacatccca
cgcagtcccttcaaagtcatggctactgatgaggtacccatgatgcaagagcagaggtct
ctacagcaacaggccggcccccctggagctggcttccagccctgggtgacgtcagacagc
tacgagccaatcagcagcagcgttaatggcagcggcttcagacctttcgacatggtgata
cccttcgcctttaggaagggagaaatcaccggtgaggtgctgatgccttcaggtaaatca
gctcagccgctgatctcagacaacctggatgggacggtgacagtgcagtactcgcccact
gaggccggcctgcacgagatgcacatcaaatacaatggcacacacattccagagtctccc
cttcagttctatgtgaaccatgccagtagtcctaatgtcacagcctatggtcccggtctg
agctacggcgttgccaacaagttggccacattcaccgtcttcacagaggacgcctctgaa
ggcggtctggacttggccatcgagggtccatccaaagcggagatcagctgtatggacaac
aaggacgggacgtgcagcgtcagctacctgcccactctgcccggagactacaacattctg
gtcaaatacaacgacgaccacatcgccggcagcccgttcaccgccaggatcactcaggac
aaccagcgccgctctcaggtcaaactgggctctgcagcagatttctctctgaacattaat
gaaacggacctgagcctgctgaccgccagcatccagtcgccatcgggccgtgatgagccc
tgcctgctgaagaggatggccaacaaccacatcggtatctccttcatcccccgggaggtt
ggtgaacaccgggtcagcatcttcaagaacggccgtcatgtcgccaacagtcccatcacc
atcatggttgtccagtccgagatcggcgacgccagccaggtcaaagctcatggagacgga
ctcgtgcagggaaccaccttcaacaactccagcttcgtggtcgacacgcgggaggccggt
tatggtggcctggctctgtccattgaaggtcccagtaaggtggacatccagacggacgac
atagaagacgggacgtgtagagtcacctactgtcccactgaaccaggaaattacatcgtc
tcaatccgatttgctgaggaacatgtcccaggaagtccgttcacagtgcgggtgactgga
gagggtcgtatccgggagagcatcacccgacgacagaaggcggcatcggtttccagcgtg
gggagtgtgtgtgacctcagtctgaagataccagcgatcgacattcaggacgtcactgcc
gaggtcacttccccctccggagtcagtcagcctgccgaactggtcgctgtgggtaacgac
acctactgtgtgcgcttcgtgcccacagagatgggtgtgcacagcgtgagtgtgaggtac
aggggtgtgcacgtgccgggcagccctttccagttcaccgtggggccgctgggagagggc
ggcgctgccaaggtgagagcaggaggtccaggactggagggagcacaggcaggagagcca
gctgagttcagtatctggacaagggaggcgggggccggcggtctggccatcgccgtcgaa
ggacccagcagggcggagatctccttcgacgaccgcaaagacggatcctgcggcgtctcg
tacatcgctcaggagcccggtgattacgagatctcagtgaagttcaacgaccagcacatt
cccgacagcccttacctcgtccctgtggttgctccggcgaacgacgctcgccgcctcgct
gttaccggccttcaggagtctggtctgaaggtgaatcacccagcatcctttgcggtgcgt
ctcaacggagcacagggcaagatggcagccaaagtccacagcccctctggagctctggag
gagtgtgtcgtcactgagctggaaagagacaagtacgctgtccgattcatccccagggag
aacggtgtccactccatcgacgtcaagttcaatggctctcacatcccaggaagtcctttc
caggtcagagtcggggaaccaggacagaccggagacccaggtctggtctcagcatatgga
gctggactggagagaggcacaacaggtacccagtcagagttcatcattaacaacactaag
gcaggccccggggccttggccgtgaccatcgagggtccatccaaggtaaagatggactgc
caggaggttccagagggctacaaggtgcagtacactccaatggcacctggaaactacctg
atcagcatcaaatatggaggaccgaaccacatcaccggcagtcccttcaaggccaaagtc
acaggttctcggctggtgcacgtgaccaacgccagcgagacgtcgaccttgacagtggat
ccggcagtgagggcgtccagcagcagcttcacccagagtgccatgtccaggctgaccgac
tcggacgccagcaaggtgctgagccgaggccccggcctcagcaaggcctttgtgggccag
aggagcaacttctctgtcgactgcagcaaagcgggtaagaacatgctcctggtgggtgtg
cacggtcctcaggtcccctgtgaggaggttctggtcaaacatttgggcaacctgcagtac
aacgtaagctacctgctgaaggagcgaggcaactacatcctggtggtgaagtggggcgat
gaccacatcccgggctcccccttccacgtcgtcgtcccgtga
DBGET
integrated database retrieval system
