Lysobacter capsici: LC55x_0947
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Entry
LC55x_0947 CDS
T04162
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
lcp
Lysobacter capsici
Pathway
lcp00730
Thiamine metabolism
lcp01100
Metabolic pathways
lcp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LC55x_0947 (thiC)
Enzymes [BR:
lcp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LC55x_0947 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ALN84244
UniProt:
A0A0S2FKZ2
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All DBs
Position
1052967..1054853
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AA seq
628 aa
AA seq
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MNAVPSSKQDLIQQAEKLSADVTRPIPGSRKIHVQGSRPDLQVPMREIELARTPTIFGGE
DNVPLAVYDTSGIYTQTGANIDLVAGLAPLRAAWIAERGDTEALSGLSSEFGRKREHDPK
LAHVRFGNRPLPRRAIGTANVTQMHYARRGIVTPEMEYIAIRENQRLESIREAHLLSQHP
GQSFGANIQKIITPEFVRDEVARGRAIIPNNINHPESEPMIIGRNFLTKVNANIGNSAVS
SGIAEEVEKLVWSIRWGADTVMDLSTGKHIHETREWILRNSPVPIGTVPIYQALEKVDGR
AEELTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSILAKWCLAH
HKENFLYTHFEDICEIMKAYDVAFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKH
DVQTMIEGPGHVPMQLIKENMDKQLEVCGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIG
WFGTAMLCYVTPKEHLGLPNKEDVREGLMAYKIAAHAADLAKGHPGAQARDNAMSKARFE
FRWEDQFNLGLDPERAREYHDETLPKDAHKVAHFCSMCGPHFCSMKITQDVRDYAKEHGV
EEVAALSEGMAEKSAEFLAQGAEVYRRA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggtgccctcgagcaagcaagacctgatccagcaagccgagaagctgtcggcc
gacgtgacccgcccgattcccgggtcgcgcaagatccacgtgcaaggttcgcgcccggat
ctgcaggtgccgatgcgcgagatcgaactggcgcgcacgccgaccatcttcggcggcgaa
gacaacgtgccgctggcggtgtacgacacctcgggcatctatacccagaccggcgcgaat
atcgatctggtcgccgggctggcgccgctgcgcgcggcctggatcgccgagcgcggcgac
accgaggcgctgagcgggctgtcgtcggaattcggtcgcaagcgcgagcacgaccccaag
ctggcgcacgtgcgcttcggcaaccggccgctgccgcgccgcgcgatcggcacggccaac
gtcacccagatgcattacgcgcgccgcggcatcgtcaccccggaaatggaatacatcgcg
atccgcgagaatcagcggctggagtcgatccgcgaagcgcatctgctcagccagcatccg
ggccagagcttcggcgccaacatccagaagatcatcacccccgaattcgtccgcgacgaa
gtcgcgcgcggccgcgcgatcattccgaacaacatcaaccatcccgaaagcgagccgatg
atcatcggccgcaacttcctgaccaaggtcaatgcgaacatcggcaactcggccgtttcg
tccggcatcgccgaggaagtcgagaagctggtgtggtcgatccgctggggcgcggacacg
gtgatggacctgtcgaccggcaagcacattcacgaaacccgcgaatggatcctgcgcaat
tcgccggtgccgatcggcacggtgccgatctatcaggcgctggaaaaggtcgatggccgc
gccgaggaactgacctgggagatcttccgcgacaccctgatcgaacaggccgagcagggc
gtggattacttcaccatccatgccggcgtgctgctgcgctacgtgccgctgaccgccaag
cgcgtgaccggcatcgtttcgcgcggcggctcgatcctggccaagtggtgcctggcgcat
cacaaggaaaatttcctctacacccacttcgaagacatctgcgagatcatgaaggcctac
gacgtggccttctcgctcggcgacggtctgcgtccgggctcgatcgccgacgccaacgac
gcggcgcagttcggtgaactcgaaaccctcggcgagctgaccaagatcgcctggaagcac
gacgtgcagaccatgatcgaaggccccggccacgtgccgatgcagttgatcaaggagaac
atggacaagcagctcgaggtttgcggcgaagcgccgttctacaccctcgggccgctgacc
accgatatcgcgccgggctacgaccacatcaccagcgcgatcggcgcggcgatgatcggc
tggttcggcaccgcgatgctgtgctacgtgaccccgaaggagcacctgggcctgccgaac
aaggaagatgtgcgcgaaggtttgatggcgtacaagatcgccgcgcacgcggccgatctg
gccaagggtcatccgggcgcacaggcgcgcgacaacgcgatgagcaaggcgcgtttcgag
ttccgctgggaagatcagttcaacctgggcctggatccggaacgcgctcgcgaataccac
gacgaaaccctgccgaaggacgcgcacaaggtcgcccacttctgctcgatgtgcggcccg
cacttctgttcgatgaagatcacccaggacgtgcgcgactacgccaaggagcacggcgtg
gaagaggtcgcggccttgagcgagggcatggcggagaagtcggcggagtttttggcgcag
ggcgccgaggtttatcggcgggcttga
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