Lacticaseibacillus paracasei BD-II: LCBD_1839
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Entry
LCBD_1839 CDS
T01955
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCBD_1839 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_1839 (xseB)
Enzymes [BR:
lcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LCBD_1839 (xseB)
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LCBD_1839 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF677
RACo_linker
KxDL
TolA_bind_tri
SlyX
MbeB_N
Motif
Other DBs
NCBI-ProteinID:
AEA57335
UniProt:
A0A806E4H7
LinkDB
All DBs
Position
complement(1790040..1790267)
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AA seq
75 aa
AA seq
DB search
MAEPTFEEKLAQLENIVNQLEQGDVPLEKALDQFKAGVKLSQDLEKTLKTAEKTVTEMVS
DDGTTQPFSPKDDQQ
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctacttttgaagagaaacttgcacaattggaaaacatcgtgaatcagctt
gagcaaggcgatgtaccgctggaaaaggcattggatcaatttaaagccggtgttaaattg
agtcaggaccttgagaaaacattaaaaactgcagaaaaaaccgttaccgaaatggtcagt
gacgatgggacgacgcaaccattttcgccaaaggatgatcagcaatga
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